RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 GFRA2O00451 464 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 APOEP02649 317 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 KLKB1P03952 638 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 KCNQ1P51787 676 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 DLX2Q07687 328 aaPredicted RBP17.24■□□□□ 0.35
LINC00963-208ENST00000454968 ADCY2Q08462 1091 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 DPYSQ14117 519 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 ARHGAP15Q53QZ3 475 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 RARS2Q5T160 578 aaKnown RBP17.24■□□□□ 0.35
LINC00963-208ENST00000454968 GPR158Q5T848 1215 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 FAM72AQ5TYM5 149 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 PIK3R6Q5UE93 754 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 SLC9A4Q6AI14 798 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 FAM72DQ6L9T8 149 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 FAM72BQ86X60 149 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 CMTM8Q8IZV2 173 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 ATP6V0D2Q8N8Y2 350 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 CSPG4P5Q96PW8 444 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 NAP1L3Q99457 506 aaPredicted RBP17.24■□□□□ 0.35
LINC00963-208ENST00000454968 GKN1Q9NS71 199 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 OR12D3Q9UGF7 316 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 XPO7Q9UIA9 1087 aaKnown RBP17.24■□□□□ 0.35
LINC00963-208ENST00000454968 HS3ST4Q9Y661 456 aa17.24■□□□□ 0.35
LINC00963-208ENST00000454968 FGGP02679 453 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 MBL2P11226 248 aaPredicted RBP17.23■□□□□ 0.35
LINC00963-208ENST00000454968 CEBPBP17676 345 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 CETN2P41208 172 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 CYP1B1Q16678 543 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 ANKRD20A8PQ5CZ79 823 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 MS4A13Q5J8X5 152 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 NADSYN1Q6IA69 706 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 BBS12Q6ZW61 710 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 PQLC3Q8N755 202 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 PCDH19Q8TAB3 1148 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 ITFG1Q8TB96 612 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 WBP2Q969T9 261 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 NACA2Q9H009 215 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 PIDD1Q9HB75 910 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 TRPC7Q9HCX4 862 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 MRPS23Q9Y3D9 190 aaKnown RBP17.23■□□□□ 0.35
LINC00963-208ENST00000454968 CPQQ9Y646 472 aa17.23■□□□□ 0.35
LINC00963-208ENST00000454968 TCRBV7S2A1N4TA0A589 114 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 LRIG2O94898 1065 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 CKMP06732 381 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 CKAP4Q07065 602 aaKnown RBP17.22■□□□□ 0.35
LINC00963-208ENST00000454968 MMRN1Q13201 1228 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 FAM133BQ5BKY9 247 aaKnown RBP17.22■□□□□ 0.35
LINC00963-208ENST00000454968 HTR3DQ70Z44 454 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 NPAS3Q8IXF0 933 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 RNF34Q969K3 372 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 RPGRIP1Q96KN7 1286 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 CAPZA3Q96KX2 299 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 DCLK3Q9C098 648 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 PPARGC1AQ9UBK2 798 aaKnown RBP17.22■□□□□ 0.35
LINC00963-208ENST00000454968 SLC12A6Q9UHW9 1150 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 NUP205Q92621 2012 aa17.22■□□□□ 0.35
LINC00963-208ENST00000454968 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 DRGXA6NNA5 263 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 H3BRJ5 948 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 DCLK1O15075 740 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 ACSL4O60488 711 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 TJP3O95049 919 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 KRT10P13645 584 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 GOT1P17174 413 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 PAFAH1B1P43034 410 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 HARS2P49590 506 aaKnown RBP17.21■□□□□ 0.35
LINC00963-208ENST00000454968 KRT81Q14533 505 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 PPP6R3Q5H9R7 873 aaPredicted RBP17.21■□□□□ 0.35
LINC00963-208ENST00000454968 RFX8Q6ZV50 586 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 DDX42Q86XP3 938 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC00963-208ENST00000454968 CCDC50Q8IVM0 306 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 PLD5Q8N7P1 536 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 CEP112Q8N8E3 955 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 SMRP1Q8NCR6 262 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 SPATA4Q8NEY3 305 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 MAIP1Q8WWC4 291 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 USP13Q92995 863 aaPredicted RBP17.21■□□□□ 0.35
LINC00963-208ENST00000454968 ZSWIM3Q96MP5 696 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 GAS2L1Q99501 681 aaPredicted RBP17.21■□□□□ 0.35
LINC00963-208ENST00000454968 EPAS1Q99814 870 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 CALN1Q9BXU9 219 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 RETREG1Q9H6L5 497 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 TRPV4Q9HBA0 871 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 ARHGEF4Q9NR80 690 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 GDE1Q9NZC3 331 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 SMARCAL1Q9NZC9 954 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 AGO1Q9UL18 857 aaKnown RBP17.21■□□□□ 0.35
LINC00963-208ENST00000454968 NR2E1Q9Y466 385 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 PRUNE2Q8WUY3 3088 aa17.21■□□□□ 0.35
LINC00963-208ENST00000454968 WASH4PA8MWX3 477 aa17.21■□□□□ 0.34
LINC00963-208ENST00000454968 FSHRP23945 695 aa17.21■□□□□ 0.34
LINC00963-208ENST00000454968 CORO1AP31146 461 aaKnown RBP17.21■□□□□ 0.34
LINC00963-208ENST00000454968 ARL4AP40617 200 aa17.21■□□□□ 0.34
LINC00963-208ENST00000454968 USP4Q13107 963 aa17.21■□□□□ 0.34
LINC00963-208ENST00000454968 AUHQ13825 339 aaKnown RBP17.21■□□□□ 0.34
LINC00963-208ENST00000454968 TFDP2Q14188 446 aa17.21■□□□□ 0.34
LINC00963-208ENST00000454968 LONRF2Q1L5Z9 754 aa17.21■□□□□ 0.34
LINC00963-208ENST00000454968 PRELID2Q8N945 189 aa17.21■□□□□ 0.34
LINC00963-208ENST00000454968 C12orf50Q8NA57 414 aaPredicted RBP17.21■□□□□ 0.34
LINC00963-208ENST00000454968 RIN3Q8TB24 985 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms