RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PALM2-AKAP2B1ALY0 433 aaPredicted RBP29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 ATMINO43313 823 aaPredicted RBP29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 TSPAN3O60637 253 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 EGFP01133 1207 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 MYBL1P10243 752 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 GPD1P21695 349 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 RDXP35241 583 aaKnown RBP29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 MAGEA9P43362 315 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 ATXN1P54253 815 aaKnown RBP29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 MTA1Q13330 715 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 LRRC32Q14392 662 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 SLC18A3Q16572 532 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 C15orf59Q2T9L4 293 aaPredicted RBP29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 CCDC122Q5T0U0 273 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 RFWD3Q6PCD5 774 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 SND1Q7KZF4 910 aaKnown RBP eCLIP29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 DDI1Q8WTU0 396 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 EZH1Q92800 747 aaPredicted RBP29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 BHMTQ93088 406 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 ZNF653Q96CK0 615 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 TMA16Q96EY4 203 aaKnown RBP29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 MCEEQ96PE7 176 aa29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 RBM12Q9NTZ6 932 aaKnown RBP29.02■■■□□ 2.24
SMARCC1-203ENST00000454240 ADCY5O95622 1261 aa29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 CDC25BP30305 580 aa29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 ATP11AP98196 1134 aa29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 GFPT1Q06210 699 aaPredicted RBP29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 MESP2Q0VG99 397 aa29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 DCUN1D2Q6PH85 259 aa29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 STRADAQ7RTN6 431 aa29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 SYNPOQ8N3V7 929 aa29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 NHEJ1Q9H9Q4 299 aaPredicted RBP29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 DEC1Q9P2X7 70 aa29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 PAXBP1Q9Y5B6 917 aa29.01■■■□□ 2.23
SMARCC1-203ENST00000454240 ANKRD62A6NC57 917 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 CISD3P0C7P0 127 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 SGSHP51688 502 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 ZNF143P52747 638 aaPredicted RBP29■■■□□ 2.23
SMARCC1-203ENST00000454240 MS4A13Q5J8X5 152 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 MPP7Q5T2T1 576 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 SH3PXD2AQ5TCZ1 1133 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 PRMT1Q99873 361 aaKnown RBP29■■■□□ 2.23
SMARCC1-203ENST00000454240 TKTL2Q9H0I9 626 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 CHRDQ9H2X0 955 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 DEF6Q9H4E7 631 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 ANLNQ9NQW6 1124 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 ARHGEF4Q9NR80 690 aa29■■■□□ 2.23
SMARCC1-203ENST00000454240 DNAJC17Q9NVM6 304 aaKnown RBP29■■■□□ 2.23
SMARCC1-203ENST00000454240 I6L893 689 aaPredicted RBP28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 KAT7O95251 611 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 TACR2P21452 398 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 HOXD9P28356 352 aaPredicted RBP28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 NUBP1P53384 320 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 CDO1Q16878 200 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 FBXO43Q4G163 708 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 PREPLQ4J6C6 727 aaPredicted RBP28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 RAB6CQ53S08 254 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 RAP1GAP2Q684P5 730 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 RNF43Q68DV7 783 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 MYEOVQ96EZ4 313 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 CCDC42Q96M95 316 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 PRICKLE1Q96MT3 831 aaPredicted RBP28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 RAB6CQ9H0N0 254 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 SCINQ9Y6U3 715 aa28.99■■■□□ 2.23
SMARCC1-203ENST00000454240 TMEM191CA6NGB0 347 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 K7EQS6 105 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 TRIM24O15164 1050 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 PAGE1O75459 146 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 APODP05090 189 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 GRIA2P42262 883 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 OGDHQ02218 1023 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 DTWD2Q8NBA8 298 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 FAM172AQ8WUF8 416 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 CNPY3Q9BT09 278 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 SLC2A11Q9BYW1 496 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 THAP2Q9H0W7 228 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 MRPL47Q9HD33 250 aaKnown RBP28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 MYO1AQ9UBC5 1043 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 CLEC4EQ9ULY5 219 aa28.98■■■□□ 2.23
SMARCC1-203ENST00000454240 AKR1B10O60218 316 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 DGKGP49619 791 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 GALCP54803 685 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 HDAC4P56524 1084 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 KDSRQ06136 332 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 GAS6Q14393 721 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 GRAMD4Q6IC98 578 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 CHSY1Q86X52 802 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 FAM131BQ86XD5 332 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 TERB1Q8NA31 727 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 PANX2Q96RD6 677 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 IER2Q9BTL4 223 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 SLC27A6Q9Y2P4 619 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 HS3ST4Q9Y661 456 aa28.97■■■□□ 2.23
SMARCC1-203ENST00000454240 CCP110O43303 1012 aa28.96■■■□□ 2.23
SMARCC1-203ENST00000454240 TBL1XO60907 577 aa28.96■■■□□ 2.23
SMARCC1-203ENST00000454240 TNFRSF4P43489 277 aa28.96■■■□□ 2.23
SMARCC1-203ENST00000454240 Q6ZS52 159 aa28.96■■■□□ 2.23
SMARCC1-203ENST00000454240 SFTPA1Q8IWL2 248 aa28.96■■■□□ 2.23
SMARCC1-203ENST00000454240 LGI2Q8N0V4 545 aa28.96■■■□□ 2.23
SMARCC1-203ENST00000454240 HJURPQ8NCD3 748 aaPredicted RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms