RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 PREPLQ4J6C6 727 aaPredicted RBP20.71■□□□□ 0.91
COL9A3-202ENST00000452372 ZC3H12AQ5D1E8 599 aaKnown RBP20.71■□□□□ 0.91
COL9A3-202ENST00000452372 HGSNATQ68CP4 663 aa20.71■□□□□ 0.91
COL9A3-202ENST00000452372 PPP1R2P3Q6NXS1 205 aa20.71■□□□□ 0.91
COL9A3-202ENST00000452372 MON1BQ7L1V2 547 aa20.71■□□□□ 0.91
COL9A3-202ENST00000452372 PHTF2Q8N3S3 785 aa20.71■□□□□ 0.91
COL9A3-202ENST00000452372 ARHGEF4Q9NR80 690 aa20.71■□□□□ 0.91
COL9A3-202ENST00000452372 FBXO10Q9UK96 956 aa20.71■□□□□ 0.91
COL9A3-202ENST00000452372 RALGAPA1Q6GYQ0 2036 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 KIAA1549LQ6ZVL6 1849 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 K7EQS6 105 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 M0QYT0 321 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 KAT7O95251 611 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 APOEP02649 317 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 APODP05090 189 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 SLC2A3P11169 496 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 GZMAP12544 262 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 HOXA6P31267 233 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 GRIA2P42262 883 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 MESP2Q0VG99 397 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 SRSF5Q13243 272 aaKnown RBP20.7■□□□□ 0.9
COL9A3-202ENST00000452372 TRIM14Q14142 442 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 LPAL2Q16609 132 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 SLC25A52Q3SY17 297 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 MPPE1Q53F39 396 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 FAM133BQ5BKY9 247 aaKnown RBP20.7■□□□□ 0.9
COL9A3-202ENST00000452372 PHLDB2Q86SQ0 1253 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 GAS2L3Q86XJ1 694 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 CCDC26Q8TAB7 109 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 PGAP3Q96FM1 320 aaPredicted RBP20.7■□□□□ 0.9
COL9A3-202ENST00000452372 VCPIP1Q96JH7 1222 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 DDX50Q9BQ39 737 aaKnown RBP20.7■□□□□ 0.9
COL9A3-202ENST00000452372 TMEM51Q9NW97 253 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 PLK2Q9NYY3 685 aa20.7■□□□□ 0.9
COL9A3-202ENST00000452372 KCNU1A8MYU2 1149 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 DDX3XO00571 662 aaKnown RBP eCLIP20.69■□□□□ 0.96e-17■□□□□ 8.6
COL9A3-202ENST00000452372 AP5Z1O43299 807 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 SERPING1P05155 500 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 CCR1P32246 355 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 TNFRSF4P43489 277 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 PUM1Q14671 1186 aaKnown RBP eCLIP20.69■□□□□ 0.9
COL9A3-202ENST00000452372 RSPO4Q2I0M5 234 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-202ENST00000452372 OTUD1Q5VV17 481 aaPredicted RBP20.69■□□□□ 0.9
COL9A3-202ENST00000452372 NADSYN1Q6IA69 706 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 TRNP1Q6NT89 227 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 MCOLN2Q8IZK6 566 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 C3orf20Q8ND61 904 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 DDI1Q8WTU0 396 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 BHMTQ93088 406 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 TMA16Q96EY4 203 aaKnown RBP20.69■□□□□ 0.9
COL9A3-202ENST00000452372 BTN2A3PQ96KV6 586 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 ADAM33Q9BZ11 813 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 TRIM5Q9C035 493 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 METTL5Q9NRN9 209 aaKnown RBP20.69■□□□□ 0.9
COL9A3-202ENST00000452372 DNAJC17Q9NVM6 304 aaKnown RBP20.69■□□□□ 0.9
COL9A3-202ENST00000452372 TAS2R14Q9NYV8 317 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 SLC12A6Q9UHW9 1150 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 SPAG17Q6Q759 2223 aa20.69■□□□□ 0.9
COL9A3-202ENST00000452372 SYNJ2BP-COX16A0A087WUM0 186 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 GOLGA6L7A0A1B0GV03 622 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 TRIM24O15164 1050 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 TSPAN3O60637 253 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 RNF40O75150 1001 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 MOCS2O96007 188 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-202ENST00000452372 F9P00740 461 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 CISD3P0C7P0 127 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 KRT3P12035 628 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 SLC6A4P31645 630 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 HNRNPH3P31942 346 aaKnown RBP20.68■□□□□ 0.9
COL9A3-202ENST00000452372 SULT1E1P49888 294 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 KDSRQ06136 332 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 NME3Q13232 169 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 MTA1Q13330 715 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 PIK3R6Q5UE93 754 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 GRAMD4Q6IC98 578 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 NUDT18Q6ZVK8 323 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 BNIPLQ7Z465 357 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 GPR161Q8N6U8 529 aaKnown RBP20.68■□□□□ 0.9
COL9A3-202ENST00000452372 ATP6V0D2Q8N8Y2 350 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 TERB1Q8NA31 727 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 RNF34Q969K3 372 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 TBCBQ99426 244 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 ANP32EQ9BTT0 268 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 SLC2A11Q9BYW1 496 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 COX16Q9P0S2 106 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 CALCOCO1Q9P1Z2 691 aa20.68■□□□□ 0.9
COL9A3-202ENST00000452372 MYO18AQ92614 2054 aaKnown RBP20.68■□□□□ 0.9
COL9A3-202ENST00000452372 TCRBV5S1A1TA0A578 114 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 MED19A0JLT2 244 aaPredicted RBP20.67■□□□□ 0.9
COL9A3-202ENST00000452372 TBC1D3BA6NDS4 549 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 SIGLEC16A6NMB1 481 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 TMCO5BA8MYB1 307 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 ATG13O75143 517 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 TFE3P19532 575 aaPredicted RBP20.67■□□□□ 0.9
COL9A3-202ENST00000452372 ABCB4P21439 1286 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 DGKGP49619 791 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 CXCR3P49682 368 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 TDRD12Q587J7 1177 aaKnown RBP20.67■□□□□ 0.9
COL9A3-202ENST00000452372 MPP7Q5T2T1 576 aa20.67■□□□□ 0.9
COL9A3-202ENST00000452372 HEATR6Q6AI08 1181 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms