RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 KCTD13Q8WZ19 329 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 GOLGA1Q92805 767 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 EDEM2Q9BV94 578 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 CIPCQ9C0C6 399 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 CD93Q9NPY3 652 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 ATP13A2Q9NQ11 1180 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 CNGB3Q9NQW8 809 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 VPS45Q9NRW7 570 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 ABCC13Q9NSE7 274 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 CALCOCO1Q9P1Z2 691 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 MBD1Q9UIS9 605 aaPredicted RBP9.05□□□□□ -0.96
RFX3-209ENST00000451859 CLEC4EQ9ULY5 219 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 CYP8B1Q9UNU6 501 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 HBS1LQ9Y450 684 aaKnown RBP9.05□□□□□ -0.96
RFX3-209ENST00000451859 PCDHGA5Q9Y5G8 931 aa9.05□□□□□ -0.96
RFX3-209ENST00000451859 A0A1W2PQF6 199 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 FAM170AA1A519 330 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 BCLAF3A2AJT9 711 aaKnown RBP9.04□□□□□ -0.96
RFX3-209ENST00000451859 PES1O00541 588 aaKnown RBP9.04□□□□□ -0.96
RFX3-209ENST00000451859 FOXD2O60548 495 aaPredicted RBP9.04□□□□□ -0.96
RFX3-209ENST00000451859 PENKP01210 267 aaPredicted RBP9.04□□□□□ -0.96
RFX3-209ENST00000451859 CISD3P0C7P0 127 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 GNA15P30679 374 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 PTGER3P43115 390 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 SGSHP51688 502 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 RPL6Q02878 288 aaKnown RBP9.04□□□□□ -0.96
RFX3-209ENST00000451859 ARID5AQ03989 594 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 STARD3Q14849 445 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 STILQ15468 1287 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 TRIP4Q15650 581 aaPredicted RBP9.04□□□□□ -0.96
RFX3-209ENST00000451859 MAP7D1Q3KQU3 841 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 DPCR1Q3MIW9 517 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 MPPE1Q53F39 396 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 PPM1JQ5JR12 505 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 STPG1Q5TH74 334 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 RNF43Q68DV7 783 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 RFWD3Q6PCD5 774 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 TRIM65Q6PJ69 517 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 GBP6Q6ZN66 633 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 ANKS1BQ7Z6G8 1248 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 PASD1Q8IV76 773 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 CPXM2Q8N436 756 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 OLIG1Q8TAK6 271 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 MED15Q96RN5 788 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 NUP62CLQ9H1M0 184 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 CLSTN2Q9H4D0 955 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 STIM2Q9P246 746 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 STARD13Q9Y3M8 1113 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 STON1Q9Y6Q2 735 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 DOCK4Q8N1I0 1966 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 CACNA1EQ15878 2313 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 PLXNA2O75051 1894 aa9.04□□□□□ -0.96
RFX3-209ENST00000451859 PCDH15Q96QU1 1955 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 GOLGA6L7A0A1B0GV03 622 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 LNP1A1A4G5 178 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 KHNYNO15037 678 aaKnown RBP9.03□□□□□ -0.96
RFX3-209ENST00000451859 MED7O43513 233 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 MOCS2O96007 188 aaPredicted RBP9.03□□□□□ -0.96
RFX3-209ENST00000451859 CFIP05156 583 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 PNMA6AP0CW24 399 aaPredicted RBP9.03□□□□□ -0.96
RFX3-209ENST00000451859 NCAM1P13591 858 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 PRKCSHP14314 528 aaPredicted RBP9.03□□□□□ -0.96
RFX3-209ENST00000451859 HOXD9P28356 352 aaPredicted RBP9.03□□□□□ -0.96
RFX3-209ENST00000451859 IL12RB1P42701 662 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 MAPK8P45983 427 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 TBX4P57082 545 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 BYSLQ13895 437 aaKnown RBP9.03□□□□□ -0.96
RFX3-209ENST00000451859 EXOC3L4Q17RC7 722 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 UAP1L1Q3KQV9 507 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 LYSMD4Q5XG99 296 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 MSANTD2Q6P1R3 559 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 SERPINA13PQ6UXR4 307 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 IRF2BP1Q8IU81 584 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 ZNF366Q8N895 744 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 MLKLQ8NB16 471 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 KCNV2Q8TDN2 545 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 CYB5D2Q8WUJ1 264 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 UCMAQ8WVF2 138 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 IRGQQ8WZA9 623 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 HSFY1Q96LI6 401 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 GABRG3Q99928 467 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 FSCN3Q9NQT6 498 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 APEX2Q9UBZ4 518 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 TJP2Q9UDY2 1190 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 AJAP1Q9UKB5 411 aaPredicted RBP9.03□□□□□ -0.96
RFX3-209ENST00000451859 NAALADL1Q9UQQ1 740 aa9.03□□□□□ -0.96
RFX3-209ENST00000451859 PCNX2A6NKB5 2137 aa9.02□□□□□ -0.96
RFX3-209ENST00000451859 SYNJ2BP-COX16A0A087WUM0 186 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 IGHV1OR15-9A0A0B4J2B8 117 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 C4orf47A7E2U8 309 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 BECN2A8MW95 431 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 E5RJQ4 531 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 CAPN9O14815 690 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 TBL1XO60907 577 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 NDUFS2O75306 463 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 FBXO21O94952 628 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 EPHX1P07099 455 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 HLA-EP13747 358 aa9.02□□□□□ -0.97
RFX3-209ENST00000451859 ITPKAP23677 461 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms