RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 MAP7D3Q8IWC1 876 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 PPM1EQ8WY54 764 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 BTN2A3PQ96KV6 586 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 TMEM51Q9NW97 253 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 MTMR10Q9NXD2 777 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 CFAP97Q9P2B7 532 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 OR12D3Q9UGF7 316 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 CCL26Q9Y258 94 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 MRFAP1Q9Y605 127 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 HS3ST4Q9Y661 456 aa15.15■□□□□ 0.02
TNF-208ENST00000449264 H3BQ06 376 aaPredicted RBP15.14■□□□□ 0.01
TNF-208ENST00000449264 PGRMC1O00264 195 aaKnown RBP15.14■□□□□ 0.01
TNF-208ENST00000449264 EEF2KO00418 725 aaKnown RBP15.14■□□□□ 0.01
TNF-208ENST00000449264 CES2O00748 559 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 PRAMEF12O95522 483 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 KRT10P13645 584 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 GOT1P17174 413 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 ARL4AP40617 200 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 CDKN2BP42772 138 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 ARSEP51690 589 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 DYNLT1P63172 113 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 TFDP3Q5H9I0 405 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 RAP1GAP2Q684P5 730 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 POTEHQ6S545 545 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 CHSY1Q86X52 802 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 CREG2Q8IUH2 290 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 NPAS3Q8IXF0 933 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 ZSCAN18Q8TBC5 510 aaPredicted RBP15.14■□□□□ 0.01
TNF-208ENST00000449264 ADAMTS19Q8TE59 1207 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 GUCD1Q96NT3 240 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 HAPLN3Q96S86 360 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 EPAS1Q99814 870 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 HERPUD2Q9BSE4 406 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 OSBPL8Q9BZF1 889 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 S1PR5Q9H228 398 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 ARHGAP26Q9UNA1 814 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 SH3BP1Q9Y3L3 701 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 PRUNE2Q8WUY3 3088 aa15.14■□□□□ 0.01
TNF-208ENST00000449264 hCG_1818297A0A087WSY0 165 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 H3BRJ5 948 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 LEFTY2O00292 366 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 KLKB1P03952 638 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 SLC11A2P49281 568 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 TPI1P60174 286 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 COPS2P61201 443 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 COL19A1Q14993 1142 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 LONRF2Q1L5Z9 754 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 MS4A13Q5J8X5 152 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 GPR153Q6NV75 609 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 RFX6Q8HWS3 928 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.13■□□□□ 0.01
TNF-208ENST00000449264 SH3RF2Q8TEC5 729 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 FGF13Q92913 245 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 USP13Q92995 863 aaPredicted RBP15.13■□□□□ 0.01
TNF-208ENST00000449264 MSLNLQ96KJ4 702 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 RIPOR3Q96MK2 946 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 CSPG4P5Q96PW8 444 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 ZNF670Q9BS34 389 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 CWC15Q9P013 229 aaKnown RBP15.13■□□□□ 0.01
TNF-208ENST00000449264 ZMYM5Q9UJ78 669 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 LSM7Q9UK45 103 aaKnown RBP15.13■□□□□ 0.01
TNF-208ENST00000449264 VANGL2Q9ULK5 521 aa15.13■□□□□ 0.01
TNF-208ENST00000449264 GOLGA6L7A0A1B0GV03 622 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 DAPK3O43293 454 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 ACSL4O60488 711 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 LRIG2O94898 1065 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 PAFAH1B1P43034 410 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 PPP2R5EQ16537 467 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 NADSYN1Q6IA69 706 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 RWDD4Q6NW29 188 aaKnown RBP15.12■□□□□ 0.01
TNF-208ENST00000449264 SLC13A5Q86YT5 568 aaPredicted RBP15.12■□□□□ 0.01
TNF-208ENST00000449264 ARID3BQ8IVW6 561 aaPredicted RBP15.12■□□□□ 0.01
TNF-208ENST00000449264 RASGEF1CQ8N431 466 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 SMRP1Q8NCR6 262 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 FAM71BQ8TC56 605 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 MAK16Q9BXY0 300 aaKnown RBP15.12■□□□□ 0.01
TNF-208ENST00000449264 OSBPL2Q9H1P3 480 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 TDP1Q9NUW8 608 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 CD207Q9UJ71 328 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 DOCK4Q8N1I0 1966 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 TCRBV7S2A1N4TA0A589 114 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 SOBPA7XYQ1 873 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 PDE2AO00408 941 aaPredicted RBP15.12■□□□□ 0.01
TNF-208ENST00000449264 KCNA5P22460 613 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 IL4RP24394 825 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 MTHFRP42898 656 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 ADCY2Q08462 1091 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 SEMA3BQ13214 749 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 AUHQ13825 339 aaKnown RBP15.12■□□□□ 0.01
TNF-208ENST00000449264 WHAMMP3Q1A5X7 153 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 ANKRD20A8PQ5CZ79 823 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 RFX8Q6ZV50 586 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 C14orf80Q86SX3 495 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 DDX42Q86XP3 938 aaKnown RBP eCLIP15.12■□□□□ 0.01
TNF-208ENST00000449264 ACTRT1Q8TDG2 376 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 TSC1Q92574 1164 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 HAUS1Q96CS2 278 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 DCLK3Q9C098 648 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 POMKQ9H5K3 350 aa15.12■□□□□ 0.01
TNF-208ENST00000449264 AGO1Q9UL18 857 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms