RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GLRBP48167 497 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 SLC12A1Q13621 1099 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 MTF1Q14872 753 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PSMD6Q15008 389 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 LRIT3Q3SXY7 679 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 INTS6LQ5JSJ4 861 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CFAP157Q5JU67 520 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 LYPLAL1Q5VWZ2 237 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 OR6P1Q8NGX9 317 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 GOT1L1Q8NHS2 421 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 LENG9Q96B70 501 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 RBM41Q96IZ5 413 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 ULBP1Q9BZM6 244 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CRISPLD2Q9H0B8 497 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 CLIC5Q9NZA1 410 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 PRKAG3Q9UGI9 489 aa5.81□□□□□ -1.48
CDC42BPA-209ENST00000448940 A6NL46 340 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 UBXN8O00124 270 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 NPR3P17342 541 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 CPA2P48052 419 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TEAD2Q15562 447 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRIM67Q6ZTA4 783 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ARID3BQ8IVW6 561 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 RHOT2Q8IXI1 618 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 LZICQ8WZA0 190 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 B3GALT6Q96L58 329 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 BAG1Q99933 345 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 FANCLQ9NW38 375 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 PLK2Q9NYY3 685 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZNF212Q9UDV6 495 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 PIPSLA2A3N6 862 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 HEPACAM2A8MVW5 462 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 STX7O15400 261 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 HLA-EP13747 358 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 MCM3P25205 808 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 RAP1GAPP47736 663 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 PAPOLAP51003 745 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 MBTD1Q05BQ5 628 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 DBN1Q16643 649 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 SPECC1LQ69YQ0 1117 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ANKS1BQ7Z6G8 1248 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 MRPL43Q8N983 215 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TTC13Q8NBP0 860 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 DEFB124Q8NES8 71 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 SLC22A17Q8WUG5 538 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ELMO2Q96JJ3 720 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 NUDCD1Q96RS6 583 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 EGFL8Q99944 293 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ECT2Q9H8V3 914 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 FBXL12Q9NXK8 326 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TSPAN16Q9UKR8 245 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 NRAPQ86VF7 1730 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 B4DGG1 531 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 DRD1P21728 446 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 SERPINA4P29622 427 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 PRCPP42785 496 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 PHEXP78562 749 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ADHFE1Q8IWW8 467 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMEM161BQ8NDZ6 487 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 P3H4Q92791 437 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 PPP1R2P1Q96PQ5 205 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 PHF12Q96QT6 1004 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMX1Q9H3N1 280 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 APEX2Q9UBZ4 518 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 CRLS1Q9UJA2 301 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 A0A0B4J269 797 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 C9IYK1 514 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 SGK1O00141 431 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 SKAP2O75563 359 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TNFP01375 233 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ADH5P11766 374 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 CYP2F1P24903 491 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 MAGEA9P43362 315 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 GPR1P46091 355 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 PPP2R2AP63151 447 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 MC1RQ01726 317 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 MLIPQ5VWP3 458 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 RAET1GQ6H3X3 334 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 IRGCQ6NXR0 463 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ALKBH5Q6P6C2 394 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 PID1Q7Z2X4 250 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 FAM35AQ86V20 835 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 CAND1Q86VP6 1230 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 C1orf210Q8IVY1 113 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 MCUQ8NE86 351 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 SUSD3Q96L08 255 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 LHX5Q9H2C1 402 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 MTMR10Q9NXD2 777 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZWINTO95229 277 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 EPCAMP16422 314 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 CYP2A7P20853 494 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 GPD1P21695 349 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ATP6V1E1P36543 226 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TNFSF9P41273 254 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ANGPTL8Q6UXH0 198 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 SLC39A11Q8N1S5 342 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 ETNPPLQ8TBG4 499 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 TM9SF4Q92544 642 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 HERC2P3Q9BVR0 1158 aa5.8□□□□□ -1.48
CDC42BPA-209ENST00000448940 STK33Q9BYT3 514 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms