RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ANKLE1Q8NAG6 615 aa10.92□□□□□ -0.66
VIPAS39-203ENST00000448935 RNF34Q969K3 372 aa10.92□□□□□ -0.66
VIPAS39-203ENST00000448935 TLCD1Q96CP7 247 aa10.92□□□□□ -0.66
VIPAS39-203ENST00000448935 BRD8Q9H0E9 1235 aa10.92□□□□□ -0.66
VIPAS39-203ENST00000448935 DTLQ9NZJ0 730 aa10.92□□□□□ -0.66
VIPAS39-203ENST00000448935 XPO7Q9UIA9 1087 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-203ENST00000448935 MYO16Q9Y6X6 1858 aa10.92□□□□□ -0.66
VIPAS39-203ENST00000448935 SCN5AQ14524 2016 aa10.92□□□□□ -0.66
VIPAS39-203ENST00000448935 MICAL3Q7RTP6 2002 aa10.92□□□□□ -0.66
VIPAS39-203ENST00000448935 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 C5orf60A6NFR6 353 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 E7ESA3 106 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 CREB3O43889 395 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 CDH16O75309 829 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 DGKIO75912 1065 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 RTN3O95197 1032 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 GALTP07902 379 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SERPINB6P35237 376 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SLC11A1P49279 550 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 CCL23P55773 120 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 MAGOHP61326 146 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SARNPP82979 210 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 GBE1Q04446 702 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 TLE2Q04725 743 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 FAAP100Q0VG06 881 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 PDIA2Q13087 525 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SEMA3BQ13214 749 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 DPYSQ14117 519 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 KCNT2Q6UVM3 1135 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 TAC4Q86UU9 113 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 MON1AQ86VX9 555 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 CEP57Q86XR8 500 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 ZBED8Q8IZ13 594 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 VPS52Q8N1B4 723 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 PYROXD2Q8N2H3 581 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 ATP11CQ8NB49 1132 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 DQX1Q8TE96 717 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 PYROXD1Q8WU10 500 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 EDEM1Q92611 657 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SCLYQ96I15 445 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 C9orf72Q96LT7 481 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 CEP295NLQ96MC4 621 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 OLFM3Q96PB7 478 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 OSBPL2Q9H1P3 480 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 C10orf88Q9H8K7 445 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 PRDM10Q9NQV6 1147 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 RAB6BQ9NRW1 208 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 DNAJC17Q9NVM6 304 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SCML2Q9UQR0 700 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 VWA8A3KMH1 1905 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 PLXNA3P51805 1871 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SRRM3A6NNA2 597 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 E7EVH7 732 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 MTSS1O43312 755 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SPAG6O75602 509 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 IGLV3-25P01717 112 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 OR4Q2P0C623 313 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 CPB1P15086 417 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 MX2P20592 715 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 CCR1P32246 355 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 HPDP32754 393 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 FDFT1P37268 417 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 MAGEA6P43360 314 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 GLUD2P49448 558 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 RABGGTBP53611 331 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 GNGT1P63211 74 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 DMTNQ08495 405 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 GPR17Q13304 367 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 AUHQ13825 339 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 KCNJ11Q14654 390 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 TRIM60Q495X7 471 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 DNAJC21Q5F1R6 531 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 ARHGEF18Q6ZSZ5 1173 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 MCUQ8NE86 351 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SCAMP5Q8TAC9 235 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 UHMK1Q8TAS1 419 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 ADAM32Q8TC27 787 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 EPS8L3Q8TE67 593 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 HTR3CQ8WXA8 447 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 PWWP2AQ96N64 755 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SERPINB11Q96P15 392 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 HAPLN3Q96S86 360 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 TTPALQ9BTX7 342 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 GPR62Q9BZJ7 368 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 TKTL2Q9H0I9 626 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SMOC2Q9H3U7 446 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 SCUBE2Q9NQ36 999 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 ETNK2Q9NVF9 386 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 MARCH5Q9NX47 278 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 WBP1LQ9NX94 342 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 ZMIZ1Q9ULJ6 1067 aa10.91□□□□□ -0.66
VIPAS39-203ENST00000448935 DCLK1O15075 740 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 IRAK2O43187 625 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 OPHN1O60890 802 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 EFCAB14O75071 495 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 FBXO45P0C2W1 286 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 SLC2A3P11169 496 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 ERCC2P18074 760 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 TPSB2P20231 275 aa10.9□□□□□ -0.66
VIPAS39-203ENST00000448935 MDH1P40925 334 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms