RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 ERVMER34-1Q9H9K5 563 aa7.44□□□□□ -1.22
LRRC28-203ENST00000447360 KIAA1586Q9HCI6 787 aa7.44□□□□□ -1.22
LRRC28-203ENST00000447360 CSNK1G1Q9HCP0 422 aa7.44□□□□□ -1.22
LRRC28-203ENST00000447360 GDF3Q9NR23 364 aa7.44□□□□□ -1.22
LRRC28-203ENST00000447360 NXF1Q9UBU9 619 aaKnown RBP7.44□□□□□ -1.22
LRRC28-203ENST00000447360 SCML1Q9UN30 329 aa7.44□□□□□ -1.22
LRRC28-203ENST00000447360 PLA2G4CQ9UP65 541 aa7.44□□□□□ -1.22
LRRC28-203ENST00000447360 SCML2Q9UQR0 700 aa7.44□□□□□ -1.22
LRRC28-203ENST00000447360 K7ENP7 123 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 KLK10O43240 276 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 STC2O76061 302 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 MT-CO3P00414 261 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 KLKB1P03952 638 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 CYBBP04839 570 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 SYT1P21579 422 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 CD38P28907 300 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 ATICP31939 592 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 LSSP48449 732 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 CASP5P51878 434 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 RPS14P62263 151 aaKnown RBP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 COG7P83436 770 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 SFSWAPQ12872 951 aaKnown RBP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 LCE2DQ5TA82 110 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 INO80CQ6PI98 192 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 USP30Q70CQ3 517 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 CBWD2Q8IUF1 395 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 FUKQ8N0W3 1084 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 ZMIZ2Q8NF64 920 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 KCNE4Q8WWG9 221 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 SORCS1Q8WY21 1168 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 INTS4Q96HW7 963 aaKnown RBP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 SLC6A18Q96N87 628 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 CDK5RAP1Q96SZ6 601 aaKnown RBP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 SMOQ99835 787 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 DCLK3Q9C098 648 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 OSER1Q9NX31 292 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 TBC1D7Q9P0N9 293 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 TPX2Q9ULW0 747 aaKnown RBP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 NCKAP1Q9Y2A7 1128 aa7.43□□□□□ -1.22
LRRC28-203ENST00000447360 HEMK1Q9Y5R4 338 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 SPTAN1Q13813 2472 aaKnown RBP7.43□□□□□ -1.22
LRRC28-203ENST00000447360 TLN1Q9Y490 2541 aaKnown RBP7.42□□□□□ -1.22
LRRC28-203ENST00000447360 A0A1W2PR77 199 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 TLR4O00206 839 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 TERTO14746 1132 aaKnown RBP7.42□□□□□ -1.22
LRRC28-203ENST00000447360 BEST1O76090 585 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 BMP15O95972 392 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 WNT1P04628 370 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 MPOP05164 745 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 RARGP13631 454 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 TNNI1P19237 187 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 GALCP54803 685 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 MAP3K7CLP57077 242 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 NXPH1P58417 271 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 ASIC1P78348 528 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 BNIP3Q12983 259 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 TRPC3Q13507 836 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 PROX2Q3B8N5 592 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 FNDC3BQ53EP0 1204 aaKnown RBP7.42□□□□□ -1.22
LRRC28-203ENST00000447360 C10orf120Q5SQS8 335 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 ZNF776Q68DI1 518 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-203ENST00000447360 FAM173BQ6P4H8 233 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 XKR5Q6UX68 686 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 KDM7AQ6ZMT4 941 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 ZNF574Q6ZN55 896 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-203ENST00000447360 KANSL1Q7Z3B3 1105 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 CPXM2Q8N436 756 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 WFIKKN2Q8TEU8 576 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 SNX21Q969T3 373 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 SYAP1Q96A49 352 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-203ENST00000447360 DNAJC19Q96DA6 116 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 XYLT2Q9H1B5 865 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 VRTNQ9H8Y1 702 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 POLR1BQ9H9Y6 1135 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 NMUR1Q9HB89 426 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 PNPLA8Q9NP80 782 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 PRSS16Q9NQE7 514 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 THSD1Q9NS62 852 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 KRT82Q9NSB4 513 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 CLIC5Q9NZA1 410 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 STK17AQ9UEE5 414 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 SUN2Q9UH99 717 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 AGO1Q9UL18 857 aaKnown RBP7.42□□□□□ -1.22
LRRC28-203ENST00000447360 CLEC4EQ9ULY5 219 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 PCDHA5Q9Y5H7 936 aa7.42□□□□□ -1.22
LRRC28-203ENST00000447360 AHCTF1Q8WYP5 2266 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 A0A1W2PQH9 124 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 FRMD3A2A2Y4 597 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 FAM47DPA6NHR8 397 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 LRRC72A6NJI9 287 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 C10orf142B7Z368 130 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 K7ELQ4 463 aaPredicted RBP7.41□□□□□ -1.22
LRRC28-203ENST00000447360 MDM4O15151 490 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 CYP26A1O43174 497 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 ATP5BP06576 529 aaKnown RBP7.41□□□□□ -1.22
LRRC28-203ENST00000447360 DLDP09622 509 aaKnown RBP7.41□□□□□ -1.22
LRRC28-203ENST00000447360 FAM200BP0CF97 657 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 DLATP10515 647 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms