RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 CCDC170Q8IYT3 715 aa18.9■□□□□ 0.62
PHTF1-207ENST00000446739 SPC24Q8NBT2 197 aa18.9■□□□□ 0.62
PHTF1-207ENST00000446739 FNIP1Q8TF40 1166 aa18.9■□□□□ 0.62
PHTF1-207ENST00000446739 XPO6Q96QU8 1125 aaKnown RBP18.9■□□□□ 0.62
PHTF1-207ENST00000446739 CNPY3Q9BT09 278 aa18.9■□□□□ 0.62
PHTF1-207ENST00000446739 ARHGEF38Q9NXL2 777 aa18.9■□□□□ 0.62
PHTF1-207ENST00000446739 NDRG2Q9UN36 371 aaKnown RBP18.9■□□□□ 0.62
PHTF1-207ENST00000446739 SIT1Q9Y3P8 196 aa18.9■□□□□ 0.62
PHTF1-207ENST00000446739 GOLGA6L7A0A1B0GV03 622 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 TMEM191CA6NGB0 347 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 CACNG3O60359 315 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 CYP1A2P05177 515 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 H2AFZP0C0S5 128 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 DRD1P21728 446 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 GALK1P51570 392 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 GRSF1Q12849 480 aaKnown RBP eCLIP18.89■□□□□ 0.61
PHTF1-207ENST00000446739 TMEM196Q5HYL7 178 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 MPP7Q5T2T1 576 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 ACBD5Q5T8D3 534 aaPredicted RBP18.89■□□□□ 0.61
PHTF1-207ENST00000446739 PIK3R6Q5UE93 754 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 H2AFVQ71UI9 128 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 TMTC1Q8IUR5 882 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 ZNF687Q8N1G0 1237 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 DDI1Q8WTU0 396 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 FAM172AQ8WUF8 416 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 TMA16Q96EY4 203 aaKnown RBP18.89■□□□□ 0.61
PHTF1-207ENST00000446739 TKTL2Q9H0I9 626 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 SPTLC3Q9NUV7 552 aa18.89■□□□□ 0.61
PHTF1-207ENST00000446739 XPO7Q9UIA9 1087 aaKnown RBP18.89■□□□□ 0.61
PHTF1-207ENST00000446739 CACNA1IQ9P0X4 2223 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 TYW5A2RUC4 315 aaKnown RBP18.88■□□□□ 0.61
PHTF1-207ENST00000446739 CCP110O43303 1012 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 TSPAN3O60637 253 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 SLC6A4P31645 630 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 CYLC1P35663 651 aaPredicted RBP18.88■□□□□ 0.61
PHTF1-207ENST00000446739 ATXN1P54253 815 aaKnown RBP18.88■□□□□ 0.61
PHTF1-207ENST00000446739 HDAC4P56524 1084 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 LRRC32Q14392 662 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 MS4A13Q5J8X5 152 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 C10orf76Q5T2E6 689 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 NAIF1Q69YI7 327 aaPredicted RBP18.88■□□□□ 0.61
PHTF1-207ENST00000446739 RFWD3Q6PCD5 774 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 C12orf40Q86WS4 652 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 CHSY1Q86X52 802 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 FAM131BQ86XD5 332 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 CCDC105Q8IYK2 499 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 NAT16Q8N8M0 369 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 CTNNBL1Q8WYA6 563 aaPredicted RBP18.88■□□□□ 0.61
PHTF1-207ENST00000446739 BHMTQ93088 406 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 PNKPQ96T60 521 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 DEC1Q9P2X7 70 aa18.88■□□□□ 0.61
PHTF1-207ENST00000446739 MTF2Q9Y483 593 aaPredicted RBP18.88■□□□□ 0.61
PHTF1-207ENST00000446739 F5H5T6 163 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 TULP3O75386 442 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 PAGE1O75459 146 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 CHRNB1P11230 501 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 TACR2P21452 398 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 PSMA2P25787 234 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 MAGEA9P43362 315 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 SLC6A11P48066 632 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 GSDMDP57764 484 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 OGDHQ02218 1023 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 ARL13BQ3SXY8 428 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 DGKKQ5KSL6 1271 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 SH3PXD2AQ5TCZ1 1133 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 RAP1GAP2Q684P5 730 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 FSTL4Q6MZW2 842 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 HJURPQ8NCD3 748 aaPredicted RBP18.87■□□□□ 0.61
PHTF1-207ENST00000446739 CLDN23Q96B33 292 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 HAPLN3Q96S86 360 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 PRMT1Q99873 361 aaKnown RBP18.87■□□□□ 0.61
PHTF1-207ENST00000446739 LRFN3Q9BTN0 628 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 NUP85Q9BW27 656 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 SLC2A11Q9BYW1 496 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 ARHGEF4Q9NR80 690 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 DNAJC17Q9NVM6 304 aaKnown RBP18.87■□□□□ 0.61
PHTF1-207ENST00000446739 PLK2Q9NYY3 685 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 FBXO10Q9UK96 956 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 HS3ST4Q9Y661 456 aa18.87■□□□□ 0.61
PHTF1-207ENST00000446739 PI15O43692 258 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 LCA5LO95447 670 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 APODP05090 189 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 TMEM253P0C7T8 217 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 HOXD9P28356 352 aaPredicted RBP18.86■□□□□ 0.61
PHTF1-207ENST00000446739 GRIA2P42262 883 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 RPS9P46781 194 aaKnown RBP18.86■□□□□ 0.61
PHTF1-207ENST00000446739 FZD5Q13467 585 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 CCINQ13939 588 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 FBXO43Q4G163 708 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 RNF43Q68DV7 783 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 GRAMD4Q6IC98 578 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 NUDT18Q6ZVK8 323 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 LGI2Q8N0V4 545 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 SYNPOQ8N3V7 929 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 ZNF557Q8N988 423 aaPredicted RBP18.86■□□□□ 0.61
PHTF1-207ENST00000446739 NTAN1Q96AB6 310 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 ARHGEF26Q96DR7 871 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 P2RY11Q96G91 374 aa18.86■□□□□ 0.61
PHTF1-207ENST00000446739 PRICKLE1Q96MT3 831 aaPredicted RBP18.86■□□□□ 0.61
PHTF1-207ENST00000446739 NCAPGQ9BPX3 1015 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms