RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 CAMK2GQ13555 558 aaPredicted RBP16.09■□□□□ 0.17
SEC13-213ENST00000445064 CNGA2Q16280 664 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 FNDC3BQ53EP0 1204 aaKnown RBP16.09■□□□□ 0.17
SEC13-213ENST00000445064 RFWD3Q6PCD5 774 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 KIAA0907Q7Z7F0 614 aaPredicted RBP16.09■□□□□ 0.17
SEC13-213ENST00000445064 ADIPOR2Q86V24 386 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 SCML4Q8N228 414 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 OR2T3Q8NH03 318 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 CLEC4CQ8WTT0 213 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 TMEM245Q9H330 911 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
SEC13-213ENST00000445064 GGA2Q9UJY4 613 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 MSRB2Q9Y3D2 182 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 NFE2L3Q9Y4A8 694 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 PCDHB9Q9Y5E1 797 aa16.09■□□□□ 0.17
SEC13-213ENST00000445064 H0Y626 953 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 TBL1XO60907 577 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 TRIM16O95361 564 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 PABPC1P11940 636 aaKnown RBP16.08■□□□□ 0.16
SEC13-213ENST00000445064 BRD2P25440 801 aaKnown RBP16.08■□□□□ 0.16
SEC13-213ENST00000445064 ZNF445P59923 1031 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 HNRNPDQ14103 355 aaKnown RBP16.08■□□□□ 0.16
SEC13-213ENST00000445064 CCDC40Q4G0X9 1142 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 MBLAC2Q68D91 279 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 NAXDQ8IW45 347 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 PPM1KQ8N3J5 372 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 PNPLA1Q8N8W4 532 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 LMO3Q8TAP4 145 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 WFDC5Q8TCV5 224 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 WFIKKN2Q8TEU8 576 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 NT5C1BQ96P26 610 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 ZDHHC5Q9C0B5 715 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 MIS12Q9H081 205 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 IL21RQ9HBE5 538 aa16.08■□□□□ 0.16
SEC13-213ENST00000445064 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.08■□□□□ 0.16
SEC13-213ENST00000445064 TMEM8BA6NDV4 472 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 M0QYV0 167 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 PSMA7O14818 248 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 BCAT2O15382 392 aaPredicted RBP16.07■□□□□ 0.16
SEC13-213ENST00000445064 LATS1O95835 1130 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 LTFP02788 710 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 SLC6A4P31645 630 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 CD70P32970 193 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 ACSL1P33121 698 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 TBX4P57082 545 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 BNC1Q01954 994 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 STIM1Q13586 685 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 PTPRNQ16849 979 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 PIK3R6Q5UE93 754 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 KLHL10Q6JEL2 608 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 MSANTD2Q6P1R3 559 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 RRAGAQ7L523 313 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 UNC45BQ8IWX7 931 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 AHI1Q8N157 1196 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 IRGQQ8WZA9 623 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 DHTKD1Q96HY7 919 aaPredicted RBP16.07■□□□□ 0.16
SEC13-213ENST00000445064 CEP63Q96MT8 703 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 TIGD1Q96MW7 591 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 GTPBP4Q9BZE4 634 aaKnown RBP16.07■□□□□ 0.16
SEC13-213ENST00000445064 LHX5Q9H2C1 402 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 C6orf106Q9H6K1 298 aaPredicted RBP16.07■□□□□ 0.16
SEC13-213ENST00000445064 GAREM1Q9H706 876 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 PRSS16Q9NQE7 514 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 STIM2Q9P246 746 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 HOOK1Q9UJC3 728 aaKnown RBP16.07■□□□□ 0.16
SEC13-213ENST00000445064 SLCO1B1Q9Y6L6 691 aa16.07■□□□□ 0.16
SEC13-213ENST00000445064 CKAP5Q14008 2032 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 SRRM3A6NNA2 597 aaPredicted RBP16.06■□□□□ 0.16
SEC13-213ENST00000445064 PMM2O15305 246 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 ACSL4O60488 711 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 IGLV3-27P01718 113 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 POLR2EP19388 210 aaKnown RBP16.06■□□□□ 0.16
SEC13-213ENST00000445064 SLC11A2P49281 568 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 CSNK1EP49674 416 aaKnown RBP16.06■□□□□ 0.16
SEC13-213ENST00000445064 ZNF423Q2M1K9 1284 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 FAM133BQ5BKY9 247 aaKnown RBP16.06■□□□□ 0.16
SEC13-213ENST00000445064 RAB44Q7Z6P3 723 aaPredicted RBP16.06■□□□□ 0.16
SEC13-213ENST00000445064 ARHGEF19Q8IW93 802 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.06■□□□□ 0.16
SEC13-213ENST00000445064 C1orf216Q8TAB5 229 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 SETD7Q8WTS6 366 aaKnown RBP16.06■□□□□ 0.16
SEC13-213ENST00000445064 ZCCHC14Q8WYQ9 949 aaKnown RBP16.06■□□□□ 0.16
SEC13-213ENST00000445064 SNX19Q92543 992 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 MTG2Q9H4K7 406 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 MAN1B1Q9UKM7 699 aa16.06■□□□□ 0.16
SEC13-213ENST00000445064 A0A1B0GVT2 93 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 FAM221BA6H8Z2 402 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 ATP5BP06576 529 aaKnown RBP16.05■□□□□ 0.16
SEC13-213ENST00000445064 DLDP09622 509 aaKnown RBP16.05■□□□□ 0.16
SEC13-213ENST00000445064 MATKP42679 507 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 RPS14P62263 151 aaKnown RBP16.05■□□□□ 0.16
SEC13-213ENST00000445064 HLA-BQ31612 363 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 MPP7Q5T2T1 576 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 NADSYN1Q6IA69 706 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 TTI2Q6NXR4 508 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 SCUBE3Q8IX30 993 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 MYEOVQ96EZ4 313 aa16.05■□□□□ 0.16
SEC13-213ENST00000445064 HSFY1Q96LI6 401 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms