RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SOBPA7XYQ1 873 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 BTNL10A8MVZ5 291 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 BUB1BO60566 1050 aaPredicted RBP17.87■□□□□ 0.45
LIME1-202ENST00000444951 RNF8O76064 485 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 PROSCO94903 275 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 LMNAP02545 664 aaKnown RBP17.87■□□□□ 0.45
LIME1-202ENST00000444951 TNNT1P13805 278 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 DEKP35659 375 aaKnown RBP17.87■□□□□ 0.45
LIME1-202ENST00000444951 GJC1P36383 396 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 FZD5Q13467 585 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 PIGHQ14442 188 aaPredicted RBP17.87■□□□□ 0.45
LIME1-202ENST00000444951 TCEAL1Q15170 157 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 TPCN2Q8NHX9 752 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 FNIP1Q8TF40 1166 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 RSPRY1Q96DX4 576 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 SPATA6Q9NWH7 488 aaPredicted RBP17.87■□□□□ 0.45
LIME1-202ENST00000444951 ARHGAP26Q9UNA1 814 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 TLR6Q9Y2C9 796 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 SH3BP1Q9Y3L3 701 aa17.87■□□□□ 0.45
LIME1-202ENST00000444951 HBS1LQ9Y450 684 aaKnown RBP17.87■□□□□ 0.45
LIME1-202ENST00000444951 STC2O76061 302 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 F9P00740 461 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 IGLV3-25P01717 112 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 APOEP02649 317 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 CORO1AP31146 461 aaKnown RBP17.86■□□□□ 0.45
LIME1-202ENST00000444951 KPNA1P52294 538 aaPredicted RBP17.86■□□□□ 0.45
LIME1-202ENST00000444951 HDAC4P56524 1084 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 IFI16Q16666 785 aaKnown RBP17.86■□□□□ 0.45
LIME1-202ENST00000444951 CC2D1AQ6P1N0 951 aaPredicted RBP17.86■□□□□ 0.45
LIME1-202ENST00000444951 VITQ6UXI7 678 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 STRADAQ7RTN6 431 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 DAAM2Q86T65 1068 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 DENND1CQ8IV53 801 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 REXO1L1PQ8IX06 675 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 CCAR2Q8N163 923 aaKnown RBP17.86■□□□□ 0.45
LIME1-202ENST00000444951 CELF5Q8N6W0 485 aaKnown RBP17.86■□□□□ 0.45
LIME1-202ENST00000444951 CENPIQ92674 756 aaPredicted RBP17.86■□□□□ 0.45
LIME1-202ENST00000444951 PLD4Q96BZ4 506 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 FCRL2Q96LA5 508 aaPredicted RBP17.86■□□□□ 0.45
LIME1-202ENST00000444951 WDCPQ9H6R7 721 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 ZWILCHQ9H900 591 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 ZFP14Q9HCL3 533 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 TMPRSS4Q9NRS4 437 aa17.86■□□□□ 0.45
LIME1-202ENST00000444951 HEPACAM2A8MVW5 462 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 SPOPO43791 374 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 LRCH4O75427 683 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 PALMO75781 387 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 TCF4P15884 667 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 CCR1P32246 355 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 HELZP42694 1942 aaKnown RBP17.85■□□□□ 0.45
LIME1-202ENST00000444951 HARS2P49590 506 aaKnown RBP17.85■□□□□ 0.45
LIME1-202ENST00000444951 CXCR3P49682 368 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 HADHBP55084 474 aaKnown RBP17.85■□□□□ 0.45
LIME1-202ENST00000444951 DDX42Q86XP3 938 aaKnown RBP eCLIP17.85■□□□□ 0.45
LIME1-202ENST00000444951 ZNF687Q8N1G0 1237 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 DCLK2Q8N568 766 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 ARFGAP1Q8N6T3 406 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 RIN3Q8TB24 985 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 CLDN23Q96B33 292 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 PGAP3Q96FM1 320 aaPredicted RBP17.85■□□□□ 0.45
LIME1-202ENST00000444951 OSBPL6Q9BZF3 934 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 TKTL2Q9H0I9 626 aa17.85■□□□□ 0.45
LIME1-202ENST00000444951 LSM7Q9UK45 103 aaKnown RBP17.85■□□□□ 0.45
LIME1-202ENST00000444951 CEP250Q9BV73 2442 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 NUP210Q8TEM1 1887 aaPredicted RBP17.84■□□□□ 0.45
LIME1-202ENST00000444951 GRID2IPA4D2P6 1211 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 PRPSAP2O60256 369 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 ENDOD1O94919 500 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 COMTP21964 271 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 MIPP30301 263 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 NNTQ13423 1086 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 ZNF77Q15935 545 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 HS1BP3Q53T59 392 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 NUGGCQ68CJ6 796 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 UNC45BQ8IWX7 931 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 CCDC185Q8N715 623 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 NIPA2Q8N8Q9 360 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 SUMF1Q8NBK3 374 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 SLC39A13Q96H72 371 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 LRRC3BQ96PB8 259 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 IRX2Q9BZI1 471 aaPredicted RBP17.84■□□□□ 0.45
LIME1-202ENST00000444951 SEMA4AQ9H3S1 761 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 KIF9Q9HAQ2 790 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.84■□□□□ 0.453e-8■□□□□ 11.1
LIME1-202ENST00000444951 GPATCH2LQ9NWQ4 482 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 SLC12A6Q9UHW9 1150 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 XPO7Q9UIA9 1087 aaKnown RBP17.84■□□□□ 0.45
LIME1-202ENST00000444951 LCMT1Q9UIC8 334 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 ALG6Q9Y672 507 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 CAPN6Q9Y6Q1 641 aa17.84■□□□□ 0.45
LIME1-202ENST00000444951 LAMTOR5O43504 91 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 IGLV3-27P01718 113 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 KLKB1P03952 638 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 SLC2A3P11169 496 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 WEE1P30291 646 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 GGCXP38435 758 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 ID4P47928 161 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 CSTF1Q05048 431 aaKnown RBP17.83■□□□□ 0.44
LIME1-202ENST00000444951 RING1Q06587 406 aa17.83■□□□□ 0.44
LIME1-202ENST00000444951 USP4Q13107 963 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms