RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 SLC2A11Q9BYW1 496 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 RBSNQ9H1K0 784 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 PRMT8Q9NR22 394 aaPredicted RBP18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 ATG2BQ96BY7 2078 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 GFRA2O00451 464 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 DDX3XO00571 662 aaKnown RBP eCLIP18.09■□□□□ 0.492e-7■■□□□ 13.3
SMARCAL1-209ENST00000444508 TRIM24O15164 1050 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 TBL1XO60907 577 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 CISD3P0C7P0 127 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 GZMAP12544 262 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 PDGFRAP16234 1089 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 HOXD9P28356 352 aaPredicted RBP18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 CXCR3P49682 368 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 MRPS21P82921 87 aaKnown RBP18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 SATB1Q01826 763 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 TSR1Q2NL82 804 aaKnown RBP18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 BRMS1LQ5PSV4 323 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 MPP7Q5T2T1 576 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 OTUD1Q5VV17 481 aaPredicted RBP18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 HGSNATQ68CP4 663 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 CCDC117Q8IWD4 279 aaPredicted RBP18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 MAML2Q8IZL2 1156 aaPredicted RBP18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 OLIG1Q8TAK6 271 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 USP33Q8TEY7 942 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 P2RY11Q96G91 374 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 WDCPQ9H6R7 721 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 PIGVQ9NUD9 493 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 TAS2R14Q9NYV8 317 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 XPO7Q9UIA9 1087 aaKnown RBP18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 FBXO10Q9UK96 956 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 SLC8A2Q9UPR5 921 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 SLC27A6Q9Y2P4 619 aa18.09■□□□□ 0.49
SMARCAL1-209ENST00000444508 SIGLEC16A6NMB1 481 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 F5H5T6 163 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 PAPSS2O95340 614 aaPredicted RBP18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 GJB6O95452 261 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 SP9P0CG40 484 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 TFE3P19532 575 aaPredicted RBP18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 TACR2P21452 398 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 RDXP35241 583 aaKnown RBP18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 ATP11AP98196 1134 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 ZNF528Q3MIS6 628 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 MS4A13Q5J8X5 152 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 RAP1GAP2Q684P5 730 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 TRNP1Q6NT89 227 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 PKN3Q6P5Z2 889 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 DCUN1D2Q6PH85 259 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 SFTPA1Q8IWL2 248 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 LGI2Q8N0V4 545 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 ZNF557Q8N988 423 aaPredicted RBP18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 JOSD2Q8TAC2 188 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 KCNV2Q8TDN2 545 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 RXFP2Q8WXD0 754 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 TRIM11Q96F44 468 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 ZNHIT6Q9NWK9 470 aaKnown RBP18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 CALCOCO1Q9P1Z2 691 aa18.08■□□□□ 0.48
SMARCAL1-209ENST00000444508 C2CD4BA6NLJ0 364 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 RTN2O75298 545 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 FTLP02792 175 aaPredicted RBP18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 DESP17661 470 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 GPD1P21695 349 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 RRM1P23921 792 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 RFC1P35251 1148 aaPredicted RBP18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 TIE1P35590 1138 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 PTPN9P43378 593 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 SGSHP51688 502 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 CDO1Q16878 200 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 HSF5Q4G112 596 aaPredicted RBP18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 RABGAP1LQ5R372 815 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 TSSK4Q6SA08 328 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 TRMT11Q7Z4G4 463 aaKnown RBP18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 ANKS1BQ7Z6G8 1248 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 ZNF513Q8N8E2 541 aaPredicted RBP18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 OR8K1Q8NGG5 319 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 PRICKLE1Q96MT3 831 aaPredicted RBP18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 FAM126AQ9BYI3 521 aaPredicted RBP18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 ADAM33Q9BZ11 813 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 TKTL2Q9H0I9 626 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 PARVAQ9NVD7 372 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 STIM2Q9P246 746 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 ADAMTS1Q9UHI8 967 aa18.07■□□□□ 0.48
SMARCAL1-209ENST00000444508 PAGE1O75459 146 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 KLF8O95600 359 aaPredicted RBP18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 ADCY5O95622 1261 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 PLEKP08567 350 aaPredicted RBP18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 HNRNPH3P31942 346 aaKnown RBP18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 KIR2DL1P43626 348 aaPredicted RBP18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 NRLP54845 237 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 RPS24P62847 133 aaKnown RBP18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 NHLH1Q02575 133 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 CCDC14Q49A88 953 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 EMC10Q5UCC4 262 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 WDR59Q6PJI9 974 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 ZC3H14Q6PJT7 736 aaKnown RBP18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 SYT13Q7L8C5 426 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 TMC6Q7Z403 805 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 GAS2L3Q86XJ1 694 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 MFN1Q8IWA4 741 aa18.06■□□□□ 0.48
SMARCAL1-209ENST00000444508 DRC7Q8IY82 874 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms