RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 ZDHHC14Q8IZN3 488 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 TTC9BQ8N6N2 239 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 KLHL23Q8NBE8 558 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 P3H4Q92791 437 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 PSMG2Q969U7 264 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 AZIN2Q96A70 460 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 RTP4Q96DX8 246 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 SLC39A13Q96H72 371 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 ABHD8Q96I13 439 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 CSPG4P5Q96PW8 444 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 PNKPQ96T60 521 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 LMAN2LQ9H0V9 348 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 PLEKHA4Q9H4M7 779 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 DHX35Q9H5Z1 703 aaKnown RBP9.41□□□□□ -0.9
NR1I3-211ENST00000442691 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.41□□□□□ -0.9
NR1I3-211ENST00000442691 SLC12A6Q9UHW9 1150 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 DMGDHQ9UI17 866 aaKnown RBP9.41□□□□□ -0.9
NR1I3-211ENST00000442691 ZMYM5Q9UJ78 669 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 NR2E1Q9Y466 385 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 INSL5Q9Y5Q6 135 aa9.41□□□□□ -0.9
NR1I3-211ENST00000442691 V9GYY5 206 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-211ENST00000442691 BCLAF3A2AJT9 711 aaKnown RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 KCNU1A8MYU2 1149 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 PRRG1O14668 218 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 TEX28O15482 410 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 TTI1O43156 1089 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 ADAM12O43184 909 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 MTSS1O43312 755 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 LPXNO60711 386 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 PAPLNO95428 1278 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 LATS1O95835 1130 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 S1PR4O95977 384 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 APOEP02649 317 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 HMGA1P17096 107 aaKnown RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 IL4RP24394 825 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 VSNL1P62760 191 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 KCNC4Q03721 635 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 TAF10Q12962 218 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 NME3Q13232 169 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 DPYSQ14117 519 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 NAA30Q147X3 362 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 PAFAH1B3Q15102 231 aaKnown RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 TTC27Q6P3X3 843 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 FBXO38Q6PIJ6 1188 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 TMCO2Q7Z6W1 182 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 CDKL3Q8IVW4 592 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 UNC45BQ8IWX7 931 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 LZTR1Q8N653 840 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 ALLCQ8N6M5 410 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 CCDC185Q8N715 623 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 PLD5Q8N7P1 536 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 ATP6V0D2Q8N8Y2 350 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 MRPL43Q8N983 215 aaKnown RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 LEMD2Q8NC56 503 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 PCDH19Q8TAB3 1148 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 CAVIN3Q969G5 261 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 RNF166Q96A37 237 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 BTN2A3PQ96KV6 586 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 TGS1Q96RS0 853 aaKnown RBP9.4□□□□□ -0.9
NR1I3-211ENST00000442691 FERMT1Q9BQL6 677 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 HERPUD2Q9BSE4 406 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 HEMGNQ9BXL5 484 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 CRISPLD1Q9H336 500 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 VIPAS39Q9H9C1 493 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 NMUR1Q9HB89 426 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 CYP4F11Q9HBI6 524 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 PCDH9Q9HC56 1237 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 EPB41L5Q9HCM4 733 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 TLR9Q9NR96 1032 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 TRPM5Q9NZQ8 1165 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 GMIPQ9P107 970 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 CALCOCO1Q9P1Z2 691 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 WHRNQ9P202 907 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 NEU2Q9Y3R4 380 aa9.4□□□□□ -0.9
NR1I3-211ENST00000442691 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-211ENST00000442691 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-211ENST00000442691 C2orf71A6NGG8 1288 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 EEF2KO00418 725 aaKnown RBP9.39□□□□□ -0.91
NR1I3-211ENST00000442691 C2CD2LO14523 706 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 TLR5O60602 858 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 SEC24AO95486 1093 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 CXCL14O95715 111 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 GLUD1P00367 558 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 CD48P09326 243 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 CNPP09543 421 aaKnown RBP9.39□□□□□ -0.91
NR1I3-211ENST00000442691 HNRNPA1P09651 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
NR1I3-211ENST00000442691 RARGP13631 454 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 KRT10P13645 584 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 SYN1P17600 705 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 ITIH2P19823 946 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 ATP5C1P36542 298 aaKnown RBP9.39□□□□□ -0.91
NR1I3-211ENST00000442691 GPR15P49685 360 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 ERVK-21P61565 698 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 PITX1P78337 314 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-211ENST00000442691 COG7P83436 770 aa9.39□□□□□ -0.91
NR1I3-211ENST00000442691 OTUD4Q01804 1114 aaKnown RBP9.39□□□□□ -0.91
NR1I3-211ENST00000442691 GUCY2DQ02846 1103 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms