RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ORC1Q13415 861 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 NCOA4Q13772 614 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 MORC3Q14149 939 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 C4orf46Q504U0 113 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 Q6ZNB5 142 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 PGBD3Q8N328 593 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 ZSWIM2Q8NEG5 633 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 HMGB4Q8WW32 186 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 TATDN2Q93075 761 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 SCNM1Q9BWG6 230 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 SCUBE2Q9NQ36 999 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 OLA1Q9NTK5 396 aaKnown RBP6.29□□□□□ -1.4
PTPRR-204ENST00000440835 USP36Q9P275 1121 aaKnown RBP6.29□□□□□ -1.4
PTPRR-204ENST00000440835 PAPSS1O43252 624 aaPredicted RBP6.29□□□□□ -1.4
PTPRR-204ENST00000440835 GJB3O75712 270 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 SYF2O95926 243 aaKnown RBP6.29□□□□□ -1.4
PTPRR-204ENST00000440835 CST3P01034 146 aaPredicted RBP6.29□□□□□ -1.4
PTPRR-204ENST00000440835 SETSIPP0DME0 302 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 NAP1L1P55209 391 aaKnown RBP6.29□□□□□ -1.4
PTPRR-204ENST00000440835 MYL6P60660 151 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 ZBTB16Q05516 673 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 KDSRQ06136 332 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 DPYDQ12882 1025 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 SUZ12Q15022 739 aaKnown RBP6.29□□□□□ -1.4
PTPRR-204ENST00000440835 INAVAQ3KP66 663 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 ZACNQ401N2 412 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 KLHL10Q6JEL2 608 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 FUKQ8N0W3 1084 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 DEFB124Q8NES8 71 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 WFIKKN2Q8TEU8 576 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 TACO1Q9BSH4 297 aaKnown RBP6.29□□□□□ -1.4
PTPRR-204ENST00000440835 RSPH9Q9H1X1 276 aaPredicted RBP6.29□□□□□ -1.4
PTPRR-204ENST00000440835 SMOC1Q9H4F8 434 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 EXOC1Q9NV70 894 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 PCDHB9Q9Y5E1 797 aa6.29□□□□□ -1.4
PTPRR-204ENST00000440835 MAP1BP46821 2468 aaKnown RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 TPRP12270 2363 aaKnown RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 A0A087X0B3 334 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 A0A1W2PQF6 199 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CALUO43852 315 aaPredicted RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 GREM1O60565 184 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 ABL1P00519 1130 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 ASS1P00966 412 aaKnown RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 PENKP01210 267 aaPredicted RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CYBBP04839 570 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CISD3P0C7P0 127 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CD6P30203 668 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 DGKGP49619 791 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CYP2J2P51589 502 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 BIRC3Q13489 604 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 UAP1L1Q3KQV9 507 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 DPCR1Q3MIW9 517 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 EMC10Q5UCC4 262 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 PAQR9Q6ZVX9 377 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 TMEM139Q8IV31 216 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 BBS7Q8IWZ6 715 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 FAM217AQ8IXS0 508 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 SCML4Q8N228 414 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 MSANTD4Q8NCY6 345 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 NOC3LQ8WTT2 800 aaKnown RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 ZNF516Q92618 1163 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 PLD4Q96BZ4 506 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 NT5C1AQ9BXI3 368 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 FAM107BQ9H098 131 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 IKZF4Q9H2S9 585 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 RABEP2Q9H5N1 569 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 ITM2CQ9NQX7 267 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 KRT82Q9NSB4 513 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 DNAJC17Q9NVM6 304 aaKnown RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 GMIPQ9P107 970 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 THAP10Q9P2Z0 257 aaPredicted RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 SCML1Q9UN30 329 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 PPP2R2CQ9Y2T4 447 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CAPN7Q9Y6W3 813 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 ATG2BQ96BY7 2078 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 DMDP11532 3685 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 USP24Q9UPU5 2620 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CKAP5Q14008 2032 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 SRRM3A6NNA2 597 aaPredicted RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 C1QTNF9BB2RNN3 333 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CCP110O43303 1012 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 ABCB7O75027 752 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 DKK1O94907 266 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CFIP05156 583 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 C1QTNF9P0C862 333 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CD59P13987 128 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 TYRP14679 529 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 RPL13P26373 211 aaKnown RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 SLC8A3P57103 927 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 VSNL1P62760 191 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 IRX1P78414 480 aaPredicted RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 ANO4Q32M45 955 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 ZNF658Q5TYW1 1059 aaPredicted RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 DBX2Q6ZNG2 339 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 INTS8Q75QN2 995 aaKnown RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 C12orf40Q86WS4 652 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 TMEFF1Q8IYR6 380 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 MINDY1Q8N5J2 469 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms