RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 PIK3R6Q5UE93 754 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 PEAR1Q5VY43 1037 aaPredicted RBP19.55■□□□□ 0.72
CCDC78-204ENST00000439619 DENND1BQ6P3S1 775 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 CHST9Q7L1S5 443 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 TMPRSS6Q8IU80 811 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 DQX1Q8TE96 717 aaKnown RBP19.55■□□□□ 0.72
CCDC78-204ENST00000439619 HSPA12BQ96MM6 686 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 CLSTN2Q9H4D0 955 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 THAP9Q9H5L6 903 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 TMEM74BQ9NUR3 256 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 SLC12A6Q9UHW9 1150 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 EML5Q05BV3 1969 aa19.55■□□□□ 0.72
CCDC78-204ENST00000439619 RALGAPA1Q6GYQ0 2036 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 SPAG17Q6Q759 2223 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 SERPINF2P08697 491 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 ENGP17813 658 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 POLR2EP19388 210 aaKnown RBP19.54■□□□□ 0.72
CCDC78-204ENST00000439619 HLA-FP30511 346 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 MAPK8P45983 427 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 NOVA1P51513 510 aaKnown RBP19.54■□□□□ 0.72
CCDC78-204ENST00000439619 YWHAZP63104 245 aaKnown RBP19.54■□□□□ 0.72
CCDC78-204ENST00000439619 PTK2Q05397 1052 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 MFN1Q8IWA4 741 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCDC78-204ENST00000439619 ZNF419Q96HQ0 510 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-204ENST00000439619 SLC4A5Q9BY07 1137 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 SLC6A17Q9H1V8 727 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 FBRSQ9HAH7 460 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 POPDC2Q9HBU9 364 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 ITM2CQ9NQX7 267 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 NAALADL1Q9UQQ1 740 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 MYOFQ9NZM1 2061 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 NCOR2Q9Y618 2525 aa19.54■□□□□ 0.72
CCDC78-204ENST00000439619 MEI4A8MW99 385 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 SYPP08247 313 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 SLC9A1P19634 815 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 ST8SIA6P61647 398 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 MAN2A1Q16706 1144 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 PSAPL1Q6NUJ1 521 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 RFWD3Q6PCD5 774 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 TMEM110Q86TL2 294 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 HDDC3Q8N4P3 179 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 CADM4Q8NFZ8 388 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 SORCS1Q8WY21 1168 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 TOE1Q96GM8 510 aaKnown RBP19.53■□□□□ 0.72
CCDC78-204ENST00000439619 NUP58Q9BVL2 599 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 MKRN2Q9H000 416 aaKnown RBP19.53■□□□□ 0.72
CCDC78-204ENST00000439619 NUP62CLQ9H1M0 184 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 SLC32A1Q9H598 525 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 STIM2Q9P246 746 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 USP36Q9P275 1121 aaKnown RBP19.53■□□□□ 0.72
CCDC78-204ENST00000439619 CEP83Q9Y592 693 aa19.53■□□□□ 0.72
CCDC78-204ENST00000439619 E5RJQ4 531 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 CDX4O14627 284 aaPredicted RBP19.52■□□□□ 0.72
CCDC78-204ENST00000439619 DLDP09622 509 aaKnown RBP19.52■□□□□ 0.72
CCDC78-204ENST00000439619 SLC2A3P11169 496 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 CSRP1P21291 193 aaKnown RBP19.52■□□□□ 0.72
CCDC78-204ENST00000439619 PRKCHP24723 683 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 PON1P27169 355 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 ERCC5P28715 1186 aaPredicted RBP19.52■□□□□ 0.72
CCDC78-204ENST00000439619 KRT9P35527 623 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 TPMTP51580 245 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 PDCLQ13371 301 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 CDH18Q13634 790 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 N4BP2L1Q5TBK1 243 aaPredicted RBP19.52■□□□□ 0.72
CCDC78-204ENST00000439619 TMEM215Q68D42 235 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 MBLAC2Q68D91 279 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 GJB7Q6PEY0 223 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 OR2T3Q8NH03 318 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 GTPBP2Q9BX10 602 aaKnown RBP19.52■□□□□ 0.72
CCDC78-204ENST00000439619 TJP2Q9UDY2 1190 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 SUN2Q9UH99 717 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 ANGPTL2Q9UKU9 493 aa19.52■□□□□ 0.72
CCDC78-204ENST00000439619 SDK1Q7Z5N4 2213 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 GOLGA6L7A0A1B0GV03 622 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 PES1O00541 588 aaKnown RBP19.51■□□□□ 0.71
CCDC78-204ENST00000439619 PAPSS1O43252 624 aaPredicted RBP19.51■□□□□ 0.71
CCDC78-204ENST00000439619 MOCS3O95396 460 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 MOCS2O96007 188 aaPredicted RBP19.51■□□□□ 0.71
CCDC78-204ENST00000439619 FYNP06241 537 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 GLI1P08151 1106 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 CEACAM1P13688 526 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 BPIFB4P59827 614 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 CDK17Q00537 523 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 MTA1Q13330 715 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 CAMK2GQ13555 558 aaPredicted RBP19.51■□□□□ 0.71
CCDC78-204ENST00000439619 FAM133BQ5BKY9 247 aaKnown RBP19.51■□□□□ 0.71
CCDC78-204ENST00000439619 EFHC1Q5JVL4 640 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 SH3PXD2AQ5TCZ1 1133 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 KIAA0907Q7Z7F0 614 aaPredicted RBP19.51■□□□□ 0.71
CCDC78-204ENST00000439619 TAC4Q86UU9 113 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 ADIPOR2Q86V24 386 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 SLC41A1Q8IVJ1 513 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 CARNMT1Q8N4J0 409 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 FIBINQ8TAL6 211 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 ADAM32Q8TC27 787 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 CYB5D2Q8WUJ1 264 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 SHC3Q92529 594 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 PPP1R13BQ96KQ4 1090 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 FCRL2Q96LA5 508 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms