RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 NADK2Q4G0N4 442 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 SPDYCQ5MJ68 293 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 C15orf39Q6ZRI6 1047 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CMC1Q7Z7K0 106 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 DHDDSQ86SQ9 333 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 PPIL6Q8IXY8 311 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ENDOVQ8N8Q3 282 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CLEC4CQ8WTT0 213 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 WWP1Q9H0M0 922 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 PDLIM7Q9NR12 457 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 LGALS13Q9UHV8 139 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 TAGLN3Q9UI15 199 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 GOLGA4Q13439 2230 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 C9JVG2 144 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 KRT37O76014 449 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 DLDP09622 509 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 HOXC6P09630 235 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 GPD1P21695 349 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 OCRLQ01968 901 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 KLF1Q13351 362 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 TNFAIP8L3Q5GJ75 292 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 RNASEH2BQ5TBB1 312 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 MAP1SQ66K74 1059 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 FAM183BPQ6ZVS7 135 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 MPP5Q8N3R9 675 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 DNERQ8NFT8 737 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 AZIN2Q96A70 460 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 PTCD3Q96EY7 689 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 KCNK13Q9HB14 408 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 XAB2Q9HCS7 855 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 DDX56Q9NY93 547 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ERAP1Q9NZ08 941 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 THSD7AQ9UPZ6 1657 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ITGA2BP08514 1039 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 KLRC2P26717 231 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ASPAP45381 313 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 COPAP53621 1224 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CA9Q16790 459 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 KLHL38Q2WGJ6 581 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 FASTKD1Q53R41 847 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CELF3Q5SZQ8 465 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZPBP2Q6X784 338 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 TSHZ1Q6ZSZ6 1077 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZNF354CQ86Y25 554 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 WDR75Q8IWA0 830 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CCNYL1Q8N7R7 359 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 GATA6Q92908 595 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 PPP2R3CQ969Q6 453 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 TMIGD2Q96BF3 282 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CDCA5Q96FF9 252 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZBED3Q96IU2 234 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 NT5C1AQ9BXI3 368 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 C2orf40Q9H1Z8 148 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 TMPRSS4Q9NRS4 437 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZNF212Q9UDV6 495 aa10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CPSF3Q9UKF6 684 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 PIN4Q9Y237 131 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-202ENST00000439374 CROCCQ5TZA2 2017 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 NFASCO94856 1347 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 ARSAP15289 507 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 TFE3P19532 575 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 PCSK6P29122 969 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 AVPR1AP37288 418 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 STT3AP46977 705 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 PPP1R26Q5T8A7 1209 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 KRT80Q6KB66 452 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 CTU1Q7Z7A3 348 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 C12orf50Q8NA57 414 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 TRPV6Q9H1D0 765 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 UBP1Q9NZI7 540 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 HSPA4LO95757 839 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 CTSHP09668 335 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 CCDC15Q0P6D6 951 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 FOXD4Q12950 439 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 DPYSL3Q14195 570 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 MORF4L2Q15014 288 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 DCAF6Q58WW2 860 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 LDLRAP1Q5SW96 308 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 N4BP2L1Q5TBK1 243 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 TMEM198Q66K66 360 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 ARMCX2Q7L311 632 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 PCDH20Q8N6Y1 951 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 BANPQ8N9N5 519 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 SCYL1Q96KG9 808 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 CCT7Q99832 543 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 MRPL45Q9BRJ2 306 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 CYLDQ9NQC7 956 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 SAR1AQ9NR31 198 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 C20orf96Q9NUD7 363 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 SIX4Q9UIU6 781 aa10.22□□□□□ -0.77
CDC42SE1-202ENST00000439374 H3BRB1 525 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 HBP1O60381 514 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 SURF1Q15526 300 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 PMF1Q6P1K2 205 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 FBXL19Q6PCT2 694 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 ANKRD23Q86SG2 305 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 RNF135Q8IUD6 432 aa10.21□□□□□ -0.77
CDC42SE1-202ENST00000439374 PYROXD2Q8N2H3 581 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms