RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GRID1Q9ULK0 1009 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 SIN3BO75182 1162 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 CRTAMO95727 393 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 TNFSF9P41273 254 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 WASHC5Q12768 1159 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 RALGPS1Q5JS13 557 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 ZNF772Q68DY9 489 aaPredicted RBP16.24■□□□□ 0.19
DHFR-201ENST00000439211 DENND5BQ6ZUT9 1274 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 PPIL6Q8IXY8 311 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 METTL25Q8N6Q8 603 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 TTC13Q8NBP0 860 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 TAMM41Q96BW9 452 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 ACAD9Q9H845 621 aa16.24■□□□□ 0.19
DHFR-201ENST00000439211 CST3P01034 146 aaPredicted RBP16.23■□□□□ 0.19
DHFR-201ENST00000439211 GSSP48637 474 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 CXCL9Q07325 125 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 TRAF2Q12933 501 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 DCAF6Q58WW2 860 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 RHBDF2Q6PJF5 856 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 B3GNT9Q6UX72 402 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 CCDC33Q8N5R6 958 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 ATP2A3Q93084 1043 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 NIF3L1Q9GZT8 377 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 EPS15L1Q9UBC2 864 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 KAT6AQ92794 2004 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 M0QYV0 167 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 UGT1A9O60656 530 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 UGT1A6P19224 532 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 UGT1A1P22309 533 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 UGT1A4P22310 534 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 NR4A1P22736 598 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 UGT1A3P35503 534 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 UGT1A5P35504 534 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 CDH8P55286 799 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 YWHAEP62258 255 aaKnown RBP16.23■□□□□ 0.19
DHFR-201ENST00000439211 PPP2R2DQ66LE6 453 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 ZNF786Q8N393 782 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 KCNK16Q96T55 309 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 TRPV6Q9H1D0 765 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 UGT1A7Q9HAW7 530 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 UGT1A10Q9HAW8 530 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 UGT1A8Q9HAW9 530 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 PSMD12O00232 456 aaPredicted RBP16.23■□□□□ 0.19
DHFR-201ENST00000439211 PRPSAP2O60256 369 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 CSDE1O75534 798 aaKnown RBP16.23■□□□□ 0.19
DHFR-201ENST00000439211 APRTP07741 180 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 STAT5BP51692 787 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 CARTPTQ16568 116 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 DEPDC1Q5TB30 811 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 DCAF15Q66K64 600 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 FBXL19Q6PCT2 694 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 TAS2R42Q7RTR8 314 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 RSPH3Q86UC2 560 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 HPS6Q86YV9 775 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 TMIGD2Q96BF3 282 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 RMND5BQ96G75 393 aaPredicted RBP16.23■□□□□ 0.19
DHFR-201ENST00000439211 CGRRF1Q99675 332 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 MRPL4Q9BYD3 311 aaKnown RBP16.23■□□□□ 0.19
DHFR-201ENST00000439211 VPS11Q9H270 941 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 MRPL46Q9H2W6 279 aaKnown RBP16.23■□□□□ 0.19
DHFR-201ENST00000439211 STRIP2Q9ULQ0 834 aa16.23■□□□□ 0.19
DHFR-201ENST00000439211 EEF1B2P24534 225 aaKnown RBP16.22■□□□□ 0.19
DHFR-201ENST00000439211 PHKA2P46019 1235 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 OCA2Q04671 838 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 MSLNQ13421 630 aaPredicted RBP16.22■□□□□ 0.19
DHFR-201ENST00000439211 CHI3L2Q15782 390 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 NBPF12Q5TAG4 269 aaPredicted RBP16.22■□□□□ 0.19
DHFR-201ENST00000439211 PQLC1Q8N2U9 271 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 RDM1Q8NG50 284 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 SERPINI1Q99574 410 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 TMEM79Q9BSE2 394 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 TEX13BQ9BXU2 312 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 C4BPAP04003 597 aaKnown RBP16.22■□□□□ 0.19
DHFR-201ENST00000439211 THRAP10827 490 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 RAB15P59190 212 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 GAD2Q05329 585 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 ALLCQ8N6M5 410 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 UBA3Q8TBC4 463 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 SLCO2A1Q92959 643 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 ALKBH8Q96BT7 664 aaKnown RBP16.22■□□□□ 0.19
DHFR-201ENST00000439211 VCPIP1Q96JH7 1222 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 NOL6Q9H6R4 1146 aaKnown RBP16.22■□□□□ 0.19
DHFR-201ENST00000439211 TXNDC16Q9P2K2 825 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 MYRFQ9Y2G1 1151 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 N6AMT1Q9Y5N5 214 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 DCAF8L1A6NGE4 600 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 TAF4O00268 1085 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 SUPT20HL2P0C7V6 817 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 GLRA2P23416 452 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 NRLP54845 237 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 FLOT2Q14254 428 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 SUPT20HL1Q3ZLR7 823 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 ZNF618Q5T7W0 954 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 HEATR4Q86WZ0 1026 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 LRRN4Q8WUT4 740 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 PCDH9Q9HC56 1237 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 VTA1Q9NP79 307 aa16.22■□□□□ 0.19
DHFR-201ENST00000439211 GIMAP4Q9NUV9 329 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms