RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SERGEFQ9UGK8 458 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 DAPP1Q9UN19 280 aa4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 HEMK1Q9Y5R4 338 aaPredicted RBP4.29□□□□□ -1.72
LSM1P1-201ENST00000438629 SPATA31A5Q5VU36 1347 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SPATA31A7Q8IWB4 1347 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 LRRC3CA6NJW4 275 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 PRRT4C9JH25 899 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SEPT4O43236 478 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 MBPP02686 304 aaPredicted RBP4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 PRKCGP05129 697 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 ENO1P06733 434 aaKnown RBP4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 VEGFAP15692 232 aaPredicted RBP4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SERPINA4P29622 427 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 ADD2P35612 726 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 PNLIPRP1P54315 467 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SLC10A2Q12908 348 aaPredicted RBP4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 BIRC3Q13489 604 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 EFR3AQ14156 821 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SMN1Q16637 294 aaKnown RBP4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 HSP90AB4PQ58FF6 505 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 TTC22Q5TAA0 569 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 CHSY1Q86X52 802 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 UEVLDQ8IX04 471 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 LAS2Q8IYD9 372 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SPPL3Q8TCT6 385 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 THAP4Q8WY91 577 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 ZNF845Q96IR2 970 aaPredicted RBP4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 ZSCAN31Q96LW9 406 aaPredicted RBP4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SEMA4CQ9C0C4 833 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SFXN1Q9H9B4 322 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 ARL8BQ9NVJ2 186 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 C11orf21Q9P2W6 132 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SRP68Q9UHB9 627 aaKnown RBP4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 SLC12A4Q9UP95 1085 aa4.28□□□□□ -1.72
LSM1P1-201ENST00000438629 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 LINC01548A6NM66 108 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 SLC38A8A6NNN8 435 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 E7EVH7 732 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 H0Y3Z8 333 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 M0QZQ0 153 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 HNRNPRO43390 633 aaKnown RBP4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 SGPL1O95470 568 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 TFRCP02786 760 aaKnown RBP4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 ALDOAP04075 364 aaKnown RBP4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 SFPQP23246 707 aaKnown RBP eCLIP4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 CERS1P27544 350 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 CD38P28907 300 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 TACR3P29371 465 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 AGTR2P50052 363 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 PAPOLAP51003 745 aaKnown RBP4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 RPL15P61313 204 aaKnown RBP4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 GPR162Q16538 588 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 TMEM95Q3KNT9 176 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 LIN54Q6MZP7 749 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 C16orf89Q6UX73 402 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 KYAT3Q6YP21 454 aaKnown RBP4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 SLC39A5Q6ZMH5 540 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 ZNF813Q6ZN06 617 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 ZNF788Q6ZQV5 615 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 MOGAT3Q86VF5 341 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 FTSJ3Q8IY81 847 aaKnown RBP4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 ASB12Q8WXK4 309 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 MCRS1Q96EZ8 462 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 P2RY11Q96G91 374 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 RITA1Q96K30 269 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 PIGSQ96S52 555 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 NPAS1Q99742 590 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 ELOVL1Q9BW60 279 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 PRDM16Q9HAZ2 1276 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 DGKBQ9Y6T7 804 aa4.27□□□□□ -1.73
LSM1P1-201ENST00000438629 CYP3A7-CYP3A51PA0A087WV96 503 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 CD63P08962 238 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 CYP2A6P11509 494 aaPredicted RBP4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 CYP3A7P24462 503 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 VPS41P49754 854 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 ACTR2P61160 394 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 RNASELQ05823 741 aaKnown RBP4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 SLC14A1Q13336 389 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 SMAD1Q15797 465 aaKnown RBP4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 FBXO47Q5MNV8 452 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 DGAT2L7PQ6IED9 249 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 ANO7Q6IWH7 933 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 RRAGAQ7L523 313 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 DNAJC10Q8IXB1 793 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 FSIP1Q8NA03 581 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 ZNF398Q8TD17 642 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 BCAS4Q8TDM0 211 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 GOLGA1Q92805 767 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 GCC1Q96CN9 775 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 TRMT61AQ96FX7 289 aaKnown RBP4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 MECRQ9BV79 373 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 TWSG1Q9GZX9 223 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 R3HDMLQ9H3Y0 253 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 ERVK-5Q9HDB9 667 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 G6PC2Q9NQR9 355 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 ASNSD1Q9NWL6 643 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 LUZP4Q9P127 313 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms