RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SLC35B2Q8TB61 432 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 C7orf43Q8WVR3 580 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF516Q92618 1163 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 NCLNQ969V3 563 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CNDP1Q96KN2 507 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 C7orf26Q96N11 449 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CATSPER2Q96P56 530 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 DDX50Q9BQ39 737 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ECSITQ9BQ95 431 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 UBE2OQ9C0C9 1292 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ASCC2Q9H1I8 757 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 IL1RL2Q9HB29 575 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 SLC38A7Q9NVC3 462 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 GID8Q9NWU2 228 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ATRNL1Q5VV63 1379 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 TPST1O60507 370 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 USP12O75317 370 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 FAM58BPP0C7Q3 252 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CCNB1P14635 433 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 KLRC2P26717 231 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 PPARGP37231 505 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 GABRB2P47870 512 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 PRKAA2P54646 552 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 DGKDQ16760 1214 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 SPDYAQ5MJ70 313 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 AAGABQ6PD74 315 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 REM2Q8IYK8 340 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 NUP93Q8N1F7 819 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CYGBQ8WWM9 190 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TFAP2BQ92481 460 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 WNK4Q96J92 1243 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 GCNAQ96QF7 691 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TXLNGYQ9BZA5 131 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 PCDH18Q9HCL0 1135 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CYP4F12Q9HCS2 524 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 SARS2Q9NP81 518 aaKnown RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 SNTG2Q9NY99 539 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TAS2R1Q9NYW7 299 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 VTI1BQ9UEU0 232 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 APPL1Q9UKG1 709 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 DPPA5A6NC42 116 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 H3BRB1 525 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 B4GALT4O60513 344 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 MAGEC1O60732 1142 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 FAM155BO75949 473 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TM7SF2O76062 418 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CD48P09326 243 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TPH1P17752 444 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 GSTT1P30711 240 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 PLOD1Q02809 727 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 ADIGQ0VDE8 80 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CDH17Q12864 832 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 MPP2Q14168 576 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 OASLQ15646 514 aaKnown RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TTC33Q6PID6 262 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 UNC5AQ6ZN44 842 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 XYLT1Q86Y38 959 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 SH3TC2Q8TF17 1288 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 PDCD6IPQ8WUM4 868 aaKnown RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 LRRN4Q8WUT4 740 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 AFG1LQ8WV93 481 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CERS2Q96G23 380 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 FIZ1Q96SL8 496 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 SPON2Q9BUD6 331 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TUT1Q9H6E5 874 aaKnown RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF711Q9Y462 761 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CHD4Q14839 1912 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 USP54Q70EL1 1684 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TYW5A2RUC4 315 aaKnown RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 E5RI56 91 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 B4GALT5O43286 388 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 PEX11AO75192 247 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 FBXO21O94952 628 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TNFAIP8O95379 198 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 PIGNO95427 931 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 VNN1O95497 513 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 ITGA2BP08514 1039 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 PSMB4P28070 264 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 ARL2P36404 184 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 NPY2RP49146 381 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 TKTL1P51854 596 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 HIRAP54198 1017 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 GDF10P55107 478 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 JAG1P78504 1218 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 MRPS22P82650 360 aaKnown RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CACNB2Q08289 660 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 AGKQ53H12 422 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 ANKRD13AQ8IZ07 590 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 PLD5Q8N7P1 536 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 GLIS1Q8NBF1 620 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 SLC4A11Q8NBS3 891 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 GSTCDQ8NEC7 633 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 SLC2A14Q8TDB8 520 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CRYGNQ8WXF5 182 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 DDX1Q92499 740 aaKnown RBP6.85□□□□□ -1.31
CSDE1-205ENST00000438362 OPTNQ96CV9 577 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 CCDC90BQ9GZT6 254 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 MTFR1LQ9H019 292 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 RNPEPQ9H4A4 650 aa6.85□□□□□ -1.31
CSDE1-205ENST00000438362 MROH8Q9H579 483 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms