RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 PHTF2Q8N3S3 785 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 RPLP0P6Q8NHW5 317 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 TRIM5Q9C035 493 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 PRMT8Q9NR22 394 aaPredicted RBP16.98■□□□□ 0.31
CTSD-205ENST00000438213 SLC27A6Q9Y2P4 619 aa16.98■□□□□ 0.31
CTSD-205ENST00000438213 ATG2BQ96BY7 2078 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 SIGLEC16A6NMB1 481 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 GFRA2O00451 464 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 TIMM44O43615 452 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 TBL1XO60907 577 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 RTN2O75298 545 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 PAPSS2O95340 614 aaPredicted RBP16.97■□□□□ 0.31
CTSD-205ENST00000438213 FLT3P36888 993 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 CXCR3P49682 368 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 SATB1Q01826 763 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 MESP2Q0VG99 397 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 MS4A13Q5J8X5 152 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 C10orf76Q5T2E6 689 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 ACBD5Q5T8D3 534 aaPredicted RBP16.97■□□□□ 0.31
CTSD-205ENST00000438213 E4F1Q66K89 784 aaPredicted RBP16.97■□□□□ 0.31
CTSD-205ENST00000438213 NADSYN1Q6IA69 706 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 SARM1Q6SZW1 724 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 SYT13Q7L8C5 426 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
CTSD-205ENST00000438213 CHSY1Q86X52 802 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 VSTM4Q8IW00 320 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 DRC7Q8IY82 874 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 HJURPQ8NCD3 748 aaPredicted RBP16.97■□□□□ 0.31
CTSD-205ENST00000438213 C3orf20Q8ND61 904 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 OR8K1Q8NGG5 319 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 RXFP2Q8WXD0 754 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 TBCBQ99426 244 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 STARD13Q9Y3M8 1113 aa16.97■□□□□ 0.31
CTSD-205ENST00000438213 TMCO5BA8MYB1 307 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 F5H5T6 163 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 TRIM24O15164 1050 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 FTLP02792 175 aaPredicted RBP16.96■□□□□ 0.31
CTSD-205ENST00000438213 DESP17661 470 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 TACR2P21452 398 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 HOXD9P28356 352 aaPredicted RBP16.96■□□□□ 0.31
CTSD-205ENST00000438213 SDC4P31431 198 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 SLC6A4P31645 630 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 TIE1P35590 1138 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 NHLH1Q02575 133 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 EMC10Q5UCC4 262 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 SDE2Q6IQ49 451 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 DNAJC24Q6P3W2 148 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 ZC3H14Q6PJT7 736 aaKnown RBP16.96■□□□□ 0.31
CTSD-205ENST00000438213 LGI2Q8N0V4 545 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 CAMKK1Q8N5S9 505 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 UCMAQ8WVF2 138 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 ATRIPQ8WXE1 791 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 CFAP57Q96MR6 1250 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.96■□□□□ 0.31
CTSD-205ENST00000438213 PIGVQ9NUD9 493 aa16.96■□□□□ 0.31
CTSD-205ENST00000438213 ZNHIT6Q9NWK9 470 aaKnown RBP16.96■□□□□ 0.31
CTSD-205ENST00000438213 C2CD4BA6NLJ0 364 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 DDX3XO00571 662 aaKnown RBP eCLIP16.95■□□□□ 0.36e-21■■□□□ 12.3
CTSD-205ENST00000438213 ENDOD1O94919 500 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 HOXA6P31267 233 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 RDXP35241 583 aaKnown RBP16.95■□□□□ 0.3
CTSD-205ENST00000438213 PTPN9P43378 593 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 KIR2DL1P43626 348 aaPredicted RBP16.95■□□□□ 0.3
CTSD-205ENST00000438213 ATP11AP98196 1134 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 EOGTQ5NDL2 527 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 RAP1GAP2Q684P5 730 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 HGSNATQ68CP4 663 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 PKN3Q6P5Z2 889 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 DCUN1D2Q6PH85 259 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 WDR59Q6PJI9 974 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 ANKS1BQ7Z6G8 1248 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 SFTPA1Q8IWL2 248 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 CCDC33Q8N5R6 958 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 EMC1Q8N766 993 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 ZNF513Q8N8E2 541 aaPredicted RBP16.95■□□□□ 0.3
CTSD-205ENST00000438213 TRIM11Q96F44 468 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 P2RY11Q96G91 374 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 TKTL2Q9H0I9 626 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 RBSNQ9H1K0 784 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 PARVAQ9NVD7 372 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 ZSCAN32Q9NX65 697 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 ARHGEF38Q9NXL2 777 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 TAS2R14Q9NYV8 317 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 STIM2Q9P246 746 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 ADAMTS1Q9UHI8 967 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 XPO7Q9UIA9 1087 aaKnown RBP16.95■□□□□ 0.3
CTSD-205ENST00000438213 MMP17Q9ULZ9 603 aa16.95■□□□□ 0.3
CTSD-205ENST00000438213 NPC1O15118 1278 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 PAGE1O75459 146 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 KLF8O95600 359 aaPredicted RBP16.94■□□□□ 0.3
CTSD-205ENST00000438213 TFE3P19532 575 aaPredicted RBP16.94■□□□□ 0.3
CTSD-205ENST00000438213 RRM1P23921 792 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 HNRNPH3P31942 346 aaKnown RBP16.94■□□□□ 0.3
CTSD-205ENST00000438213 RFC1P35251 1148 aaPredicted RBP16.94■□□□□ 0.3
CTSD-205ENST00000438213 RPS24P62847 133 aaKnown RBP16.94■□□□□ 0.3
CTSD-205ENST00000438213 DMC1Q14565 340 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 ARL13BQ3SXY8 428 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 CCDC14Q49A88 953 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 RABGAP1LQ5R372 815 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 TTC39BQ5VTQ0 682 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms