RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 M0QYT0 321 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 CAPN9O14815 690 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ZNF185O15231 689 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 RNF8O76064 485 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 URI1O94763 535 aaPredicted RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 TRUB2O95900 331 aaKnown RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 IGLV3-25P01717 112 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 CSH1P0DML2 217 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 CSH2P0DML3 217 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 EDN3P14138 238 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 MIPP30301 263 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 DNAJA1P31689 397 aaKnown RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 CXCR5P32302 372 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 PCK1P35558 622 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 NRIP1P48552 1158 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 SULT1E1P49888 294 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 DNA2P51530 1060 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ATXN1P54253 815 aaKnown RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 EPHB3P54753 998 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 RBM10P98175 930 aaKnown RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 SLC25A11Q02978 314 aaKnown RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 PLD1Q13393 1074 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 EIF4EBP2Q13542 120 aaPredicted RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 KCNC3Q14003 757 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 GRM2Q14416 872 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 VEPH1Q14D04 833 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 DUSP6Q16828 381 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 CDO1Q16878 200 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 LRIT3Q3SXY7 679 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ATP13A4Q4VNC1 1196 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 EFHC2Q5JST6 749 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 LRRC38Q5VT99 294 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 DCAF12L1Q5VU92 463 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 SNX30Q5VWJ9 437 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 BTBD8Q5XKL5 378 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 STRADAQ7RTN6 431 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 TAC4Q86UU9 113 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 RHOT1Q8IXI2 618 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ARHGAP18Q8N392 663 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 VN1R2Q8NFZ6 395 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 DQX1Q8TE96 717 aaKnown RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 UBE2Q2Q8WVN8 375 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 GOLGA1Q92805 767 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 FBXO32Q969P5 355 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 PSMG2Q969U7 264 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 PGAP3Q96FM1 320 aaPredicted RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 TRMT2BQ96GJ1 504 aaKnown RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 PEBP4Q96S96 227 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 OSBPL9Q96SU4 736 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 PSMB7Q99436 277 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 TRIM62Q9BVG3 475 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 PLEKHA4Q9H4M7 779 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ZNF576Q9H609 170 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 TLE6Q9H808 572 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ZNF334Q9HCZ1 680 aaPredicted RBP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ANLNQ9NQW6 1124 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 MAN1C1Q9NR34 630 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ABCC13Q9NSE7 274 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 PIGVQ9NUD9 493 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 CLIC5Q9NZA1 410 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 EHD2Q9NZN4 543 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 PCSK1NQ9UHG2 260 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 NUDT5Q9UKK9 219 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 STAP1Q9ULZ2 295 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 ASB3Q9Y575 518 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 HCFC2Q9Y5Z7 792 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 SAR1BQ9Y6B6 198 aa7.32□□□□□ -1.24
LSM3P3-201ENST00000436601 VWA8A3KMH1 1905 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 A0A1W2PPC1 479 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 I6L893 689 aaPredicted RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 NRG2O14511 850 aaPredicted RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 KCNK3O14649 394 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 CCL16O15467 120 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 PSTPIP1O43586 416 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 TADA3O75528 432 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 RFPL2O75678 378 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 TBX18O95935 607 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 AVPP01185 164 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 LRG1P02750 347 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 FAM157BP0CG42 384 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 RARAP10276 462 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 PYGMP11217 842 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 RARGP13631 454 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 TCP1P17987 556 aaKnown RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 RDXP35241 583 aaKnown RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 GTF2F1P35269 517 aaKnown RBP eCLIP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 SSR1P43307 286 aaKnown RBP7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 CXCR3P49682 368 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 DEUP1Q05D60 604 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 NME3Q13232 169 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 TAF12Q16514 161 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 KCNT1Q5JUK3 1230 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 PPM1LQ5SGD2 360 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 AADACL2Q6P093 401 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 MSANTD2Q6P1R3 559 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 FIGNL1Q6PIW4 674 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 RTL10Q7L3V2 364 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 POLNQ7Z5Q5 900 aa7.31□□□□□ -1.24
LSM3P3-201ENST00000436601 ANKS1BQ7Z6G8 1248 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms