RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 HARS2P49590 506 aaKnown RBP23.81■■□□□ 1.4
CPSF4-204ENST00000436336 KCNQ1P51787 676 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 NRG1Q02297 640 aaPredicted RBP23.81■■□□□ 1.4
CPSF4-204ENST00000436336 TFDP2Q14188 446 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 STXBP5Q5T5C0 1151 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 ADAT2Q7Z6V5 191 aaKnown RBP23.81■■□□□ 1.4
CPSF4-204ENST00000436336 RFX6Q8HWS3 928 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 CSPG4P5Q96PW8 444 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 GKN1Q9NS71 199 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 GOLGA6L10A0A0M3HER8 536 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 TCRBV7S2A1N4TA0A589 114 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 FAM72CH0Y354 149 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 EEF2KO00418 725 aaKnown RBP23.8■■□□□ 1.4
CPSF4-204ENST00000436336 STC2O76061 302 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 HOXB8P17481 243 aaPredicted RBP23.8■■□□□ 1.4
CPSF4-204ENST00000436336 HCAR3P49019 387 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 MLLT6P55198 1093 aaPredicted RBP23.8■■□□□ 1.4
CPSF4-204ENST00000436336 ADCY2Q08462 1091 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 FAM72AQ5TYM5 149 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 FAM72DQ6L9T8 149 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 BBS12Q6ZW61 710 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 GPR149Q86SP6 731 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 FAM72BQ86X60 149 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.8■■□□□ 1.4
CPSF4-204ENST00000436336 AZIN2Q96A70 460 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 AP1M1Q9BXS5 423 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 SIK2Q9H0K1 926 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 PRDM16Q9HAZ2 1276 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 XPO7Q9UIA9 1087 aaKnown RBP23.8■■□□□ 1.4
CPSF4-204ENST00000436336 MRPS23Q9Y3D9 190 aaKnown RBP23.8■■□□□ 1.4
CPSF4-204ENST00000436336 CPQQ9Y646 472 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 HS3ST4Q9Y661 456 aa23.8■■□□□ 1.4
CPSF4-204ENST00000436336 CCDC188H7C350 402 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 CST8O60676 142 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 HTR7P34969 479 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 ADGRE1Q14246 886 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 SIX1Q15475 284 aaPredicted RBP23.79■■□□□ 1.4
CPSF4-204ENST00000436336 ZDHHC14Q8IZN3 488 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 PCDH19Q8TAB3 1148 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 SMPD4Q9NXE4 827 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 TPI1P60174 286 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 MS4A13Q5J8X5 152 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 PIK3R6Q5UE93 754 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 SLC9A4Q6AI14 798 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 SYCE2Q6PIF2 218 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 RFX8Q6ZV50 586 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 CMTM8Q8IZV2 173 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 SNX10Q9Y5X0 201 aa23.79■■□□□ 1.4
CPSF4-204ENST00000436336 LRIG2O94898 1065 aa23.78■■□□□ 1.4
CPSF4-204ENST00000436336 AVPR1AP37288 418 aa23.78■■□□□ 1.4
CPSF4-204ENST00000436336 SLC11A2P49281 568 aa23.78■■□□□ 1.4
CPSF4-204ENST00000436336 C2orf54Q08AI8 447 aa23.78■■□□□ 1.4
CPSF4-204ENST00000436336 PQLC3Q8N755 202 aa23.78■■□□□ 1.4
CPSF4-204ENST00000436336 DCLK3Q9C098 648 aa23.78■■□□□ 1.4
CPSF4-204ENST00000436336 RBM12Q9NTZ6 932 aaKnown RBP23.78■■□□□ 1.4
CPSF4-204ENST00000436336 ARHGAP26Q9UNA1 814 aa23.78■■□□□ 1.4
CPSF4-204ENST00000436336 NR2E1Q9Y466 385 aa23.78■■□□□ 1.4
CPSF4-204ENST00000436336 APOL1O14791 398 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 ACSL4O60488 711 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 IRF1P10914 325 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 ZFXP17010 805 aaPredicted RBP23.77■■□□□ 1.4
CPSF4-204ENST00000436336 CORO1AP31146 461 aaKnown RBP23.77■■□□□ 1.4
CPSF4-204ENST00000436336 GGCXP38435 758 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 DYNLT1P63172 113 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 CTC1Q2NKJ3 1217 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 MANEALQ5VSG8 457 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 ADAMTS19Q8TE59 1207 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 LRCH3Q96II8 777 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 GAS2L1Q99501 681 aaPredicted RBP23.77■■□□□ 1.4
CPSF4-204ENST00000436336 ARHGEF4Q9NR80 690 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 STIM2Q9P246 746 aa23.77■■□□□ 1.4
CPSF4-204ENST00000436336 DAPK3O43293 454 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 LATS1O95835 1130 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 CEBPBP17676 345 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 IGFBP4P22692 258 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 ZXDBP98169 803 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 DPYSQ14117 519 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 DENND1CQ8IV53 801 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 PRELID2Q8N945 189 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 TTC13Q8NBP0 860 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 LRRN4CLQ8ND94 238 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 PRMT1Q99873 361 aaKnown RBP23.76■■□□□ 1.39
CPSF4-204ENST00000436336 APOL5Q9BWW9 433 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 SLITRK6Q9H5Y7 841 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 HOMER3Q9NSC5 361 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 CLEC1BQ9P126 229 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 E9PAM4 449 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 APOC4-APOC2K7ER74 178 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 APOC2P02655 101 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 KLKB1P03952 638 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 TGM2P21980 687 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 AMPD1P23109 780 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 HOXC13P31276 330 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 AUHQ13825 339 aaKnown RBP23.76■■□□□ 1.39
CPSF4-204ENST00000436336 CYP1B1Q16678 543 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 LRRC31Q6UY01 552 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 DDX42Q86XP3 938 aaKnown RBP eCLIP23.76■■□□□ 1.39
CPSF4-204ENST00000436336 PLD5Q8N7P1 536 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 ITFG1Q8TB96 612 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 TBC1D31Q96DN5 1066 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms