RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 XPO7Q9UIA9 1087 aaKnown RBP16.09■□□□□ 0.17
TREX1-201ENST00000433541 HCN4Q9Y3Q4 1203 aa16.09■□□□□ 0.17
TREX1-201ENST00000433541 SSU72P8A0A1W2PR75 194 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 C2CD4BA6NLJ0 364 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 CACNG3O60359 315 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 KAT7O95251 611 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 TACR2P21452 398 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 PSMA2P25787 234 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 SLC6A4P31645 630 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 MAGEA9P43362 315 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 ATXN1P54253 815 aaKnown RBP16.08■□□□□ 0.16
TREX1-201ENST00000433541 RPL7AP62424 266 aaKnown RBP16.08■□□□□ 0.16
TREX1-201ENST00000433541 MTA1Q13330 715 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 ARL13BQ3SXY8 428 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 CCDC14Q49A88 953 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 RABGAP1LQ5R372 815 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 NADSYN1Q6IA69 706 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 TRNP1Q6NT89 227 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 OLIG1Q8TAK6 271 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 FAM172AQ8WUF8 416 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 AZIN2Q96A70 460 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 CHP1Q99653 195 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 THAP2Q9H0W7 228 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 ISCUQ9H1K1 167 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 NHEJ1Q9H9Q4 299 aaPredicted RBP16.08■□□□□ 0.16
TREX1-201ENST00000433541 FBRSL1Q9HCM7 1045 aaKnown RBP16.08■□□□□ 0.16
TREX1-201ENST00000433541 TMEM51Q9NW97 253 aa16.08■□□□□ 0.16
TREX1-201ENST00000433541 SHISA7A6NL88 538 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 CCP110O43303 1012 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 RNF40O75150 1001 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 PAGE1O75459 146 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 CHRNB1P11230 501 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 GGCXP38435 758 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 GRIA2P42262 883 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 PTPN9P43378 593 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 CXCR3P49682 368 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 MAMLD1Q13495 774 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 CDH18Q13634 790 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 SLC18A3Q16572 532 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 GAB4Q2WGN9 574 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 FBXO43Q4G163 708 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 FAM133BQ5BKY9 247 aaKnown RBP16.07■□□□□ 0.16
TREX1-201ENST00000433541 C10orf76Q5T2E6 689 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 PIK3R6Q5UE93 754 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 OTUD1Q5VV17 481 aaPredicted RBP16.07■□□□□ 0.16
TREX1-201ENST00000433541 FYB2Q5VWT5 728 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 FAM217AQ8IXS0 508 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 CFAP52Q8N1V2 620 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 CARNMT1Q8N4J0 409 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 TC2NQ8N9U0 490 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 DTWD2Q8NBA8 298 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 CCDC26Q8TAB7 109 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
TREX1-201ENST00000433541 NT5C3BQ969T7 300 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 PGAP3Q96FM1 320 aaPredicted RBP16.07■□□□□ 0.16
TREX1-201ENST00000433541 RPRD1AQ96P16 312 aaPredicted RBP16.07■□□□□ 0.16
TREX1-201ENST00000433541 SPTLC3Q9NUV7 552 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 CALCOCO1Q9P1Z2 691 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 STOML2Q9UJZ1 356 aa16.07■□□□□ 0.16
TREX1-201ENST00000433541 MYO18AQ92614 2054 aaKnown RBP16.07■□□□□ 0.16
TREX1-201ENST00000433541 ZNF318Q5VUA4 2279 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 GOLGA6L3A6NEY3 463 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 H0Y626 953 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 LAMTOR5O43504 91 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 RNF8O76064 485 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 PENKP01210 267 aaPredicted RBP16.06■□□□□ 0.16
TREX1-201ENST00000433541 CDC25BP30305 580 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 RPS9P46781 194 aaKnown RBP16.06■□□□□ 0.16
TREX1-201ENST00000433541 SGSHP51688 502 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 ZNF143P52747 638 aaPredicted RBP16.06■□□□□ 0.16
TREX1-201ENST00000433541 RPS24P62847 133 aaKnown RBP16.06■□□□□ 0.16
TREX1-201ENST00000433541 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
TREX1-201ENST00000433541 CCINQ13939 588 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 ARID5BQ14865 1188 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 C2orf27AQ580R0 203 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 MS4A13Q5J8X5 152 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 SH3PXD2AQ5TCZ1 1133 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 PLEKHA7Q6IQ23 1121 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 LRRC31Q6UY01 552 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 Q6ZS52 159 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 STRADAQ7RTN6 431 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 MFN1Q8IWA4 741 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 ETFBKMTQ8IXQ9 262 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 TERB1Q8NA31 727 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 RPLP0P6Q8NHW5 317 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 CNPY3Q9BT09 278 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 ADAM33Q9BZ11 813 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 VANGL2Q9ULK5 521 aa16.06■□□□□ 0.16
TREX1-201ENST00000433541 TRIM24O15164 1050 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 IPO7O95373 1038 aaKnown RBP16.05■□□□□ 0.16
TREX1-201ENST00000433541 H2AFZP0C0S5 128 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 HOXD9P28356 352 aaPredicted RBP16.05■□□□□ 0.16
TREX1-201ENST00000433541 TIE1P35590 1138 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 GALCP54803 685 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 H2AFVQ71UI9 128 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 CIR1Q86X95 450 aaPredicted RBP16.05■□□□□ 0.16
TREX1-201ENST00000433541 SYNPOQ8N3V7 929 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 CLDN23Q96B33 292 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 PRICKLE1Q96MT3 831 aaPredicted RBP16.05■□□□□ 0.16
TREX1-201ENST00000433541 PANX2Q96RD6 677 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms