RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ANKRD20A3Q5VUR7 823 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 MGARPQ8TDB4 240 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 SCLYQ96I15 445 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 B3GALT6Q96L58 329 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 SPATA13Q96N96 652 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 CEP41Q9BYV8 373 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 ACSS3Q9H6R3 686 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 KCNK9Q9NPC2 374 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 SLC24A2Q9UI40 661 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 LRFN2Q9ULH4 789 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 RASA4BC9J798 803 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 RNF103O00237 685 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 PPP1R12AO14974 1030 aaPredicted RBP20.18■□□□□ 0.82
VRK2-205ENST00000432057 RASA4O43374 803 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 PIAS1O75925 651 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 IGLV3-25P01717 112 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 TSHRP16473 764 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 TPSB2P20231 275 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 GPR15P49685 360 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 GEMIN4P57678 1058 aaKnown RBP20.18■□□□□ 0.82
VRK2-205ENST00000432057 TPSAB1Q15661 275 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 BTBD8Q5XKL5 378 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 ZNF534Q76KX8 674 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 TRABD2AQ86V40 505 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 CEP57Q86XR8 500 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 CCNYQ8ND76 341 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 RNF34Q969K3 372 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 P2RY11Q96G91 374 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 PRMT1Q99873 361 aaKnown RBP20.18■□□□□ 0.82
VRK2-205ENST00000432057 TRIM62Q9BVG3 475 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 FRMD8Q9BZ67 464 aaPredicted RBP20.18■□□□□ 0.82
VRK2-205ENST00000432057 MARCH5Q9NX47 278 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 SEPT10Q9P0V9 454 aa20.18■□□□□ 0.82
VRK2-205ENST00000432057 PSMC3IPQ9P2W1 217 aaPredicted RBP20.18■□□□□ 0.82
VRK2-205ENST00000432057 SYN3O14994 580 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 IFNAR2P48551 515 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 HCAR3P49019 387 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 GLUD2P49448 558 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 SEMA5AQ13591 1074 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 LRRC14Q15048 493 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 PKN2Q16513 984 aaKnown RBP20.17■□□□□ 0.82
VRK2-205ENST00000432057 FAM171A1Q5VUB5 890 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 BEND5Q7L4P6 421 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 SCD5Q86SK9 330 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 NPWQ8N729 165 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 ANKRD42Q8N9B4 389 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 MCUQ8NE86 351 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 CFAP36Q96G28 342 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 PGLYRP2Q96PD5 576 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 EPAS1Q99814 870 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 GPR62Q9BZJ7 368 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 PPCSQ9HAB8 311 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 ABCC13Q9NSE7 274 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 OR12D3Q9UGF7 316 aa20.17■□□□□ 0.82
VRK2-205ENST00000432057 IRAK2O43187 625 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 ATP2A2P16615 1042 aaKnown RBP20.16■□□□□ 0.82
VRK2-205ENST00000432057 SLC11A1P49279 550 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 CBLBQ13191 982 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 MPP2Q14168 576 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 DDR2Q16832 855 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 KLHL38Q2WGJ6 581 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 CTXN3Q4LDR2 81 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 PAFAH2Q99487 392 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 BEGAINQ9BUH8 593 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 NMUR1Q9HB89 426 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 MLXIPLQ9NP71 852 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 ACTL7BQ9Y614 415 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.16■□□□□ 0.82
VRK2-205ENST00000432057 MSI1O43347 362 aaKnown RBP20.16■□□□□ 0.82
VRK2-205ENST00000432057 STK10O94804 968 aaKnown RBP20.16■□□□□ 0.82
VRK2-205ENST00000432057 LRIG2O94898 1065 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 ATN1P54259 1190 aaPredicted RBP20.16■□□□□ 0.82
VRK2-205ENST00000432057 NR1H3Q13133 447 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 NFE2Q16621 373 aaPredicted RBP20.16■□□□□ 0.82
VRK2-205ENST00000432057 QPCTQ16769 361 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 TTC9BQ8N6N2 239 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 COLGALT1Q8NBJ5 622 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 CASP10Q92851 521 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 APBB2Q92870 758 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 FUBP3Q96I24 572 aaKnown RBP eCLIP20.16■□□□□ 0.82
VRK2-205ENST00000432057 KIF9Q9HAQ2 790 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 FETUBQ9UGM5 382 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 SFMBT1Q9UHJ3 866 aa20.16■□□□□ 0.82
VRK2-205ENST00000432057 NYNRINQ9P2P1 1898 aaKnown RBP20.15■□□□□ 0.82
VRK2-205ENST00000432057 A0A1W2PQH9 124 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 TCRBV9S1A1TA0A576 114 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 KRT15P19012 456 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 PBX3P40426 434 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 WASHC5Q12768 1159 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 EIF4EBP2Q13542 120 aaPredicted RBP20.15■□□□□ 0.82
VRK2-205ENST00000432057 NPAS4Q8IUM7 802 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 CHMP6Q96FZ7 201 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 DHRS4Q9BTZ2 278 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 SMOC2Q9H3U7 446 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 NUDT5Q9UKK9 219 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 PCDHB5Q9Y5E4 795 aa20.15■□□□□ 0.82
VRK2-205ENST00000432057 EBAG9O00559 213 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 OPHN1O60890 802 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 DRD4P21917 467 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 EPHB2P29323 1055 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms