RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TTC6Q86TZ1 520 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 GJA10Q969M2 543 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 DACH2Q96NX9 599 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SYT15Q9BQS2 421 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 TXLNGYQ9BZA5 131 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 UNC93B1Q9H1C4 597 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SMOC1Q9H4F8 434 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 RNF41Q9H4P4 317 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CYP3A43Q9HB55 503 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 GJB4Q9NTQ9 266 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 TXLNGQ9NUQ3 528 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 NKIRAS2Q9NYR9 191 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SRRDQ9UH36 339 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CAMK2AQ9UQM7 478 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ASTN2O75129 1339 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CYP3A7-CYP3A51PA0A087WV96 503 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SERTM2A0A1B0GWG4 89 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L15C9J2P7 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L10C9JJH3 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L13C9JLJ4 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L12C9JPN9 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L11C9JVI0 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L21D6R901 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L18D6R9N7 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L22D6RA61 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L17D6RBQ6 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L19D6RCP7 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L20D6RJB6 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SGCEO43556 437 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 PRPSAP2O60256 369 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 VPS4BO75351 444 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ASLP04424 464 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SERPINB2P05120 415 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ADH1AP07327 375 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CYP3A7P24462 503 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 AFMP43652 599 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ARF3P61204 181 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ARF1P84077 181 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 GUCY1A3Q02108 690 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 PPARAQ07869 468 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP17L24Q0WX57 530 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ALKBH1Q13686 389 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CALCRLQ16602 461 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CCDC142Q17RM4 750 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 FNDC3BQ53EP0 1204 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CCDC157Q569K6 752 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 BEX5Q5H9J7 111 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 FAM26FQ5R3K3 315 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 YOD1Q5VVQ6 348 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 VHLLQ6RSH7 139 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CYP20A1Q6UW02 462 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CHST13Q8NET6 341 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 GDPD5Q8WTR4 605 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 LRRN4Q8WUT4 740 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 PIGKQ92643 395 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 NOC4LQ9BVI4 516 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 GSDMCQ9BYG8 508 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 TLR8Q9NR97 1041 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 TDP1Q9NUW8 608 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 SPATA6Q9NWH7 488 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 DBNLQ9UJU6 430 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 C3orf18Q9UK00 162 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 PGPEP1LA6NFU8 196 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CBY3A6NI87 242 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 TRAF5O00463 557 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 DFNA5O60443 496 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CYTIPO60759 359 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 NDUFS2O75306 463 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 JUPP14923 745 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 NCF2P19878 526 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 OGNP20774 298 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 IL15P40933 162 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CCT3P49368 545 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 PPP5CP53041 499 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 VSNL1P62760 191 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 IFI35P80217 286 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 FAM189BP81408 668 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 PDIA2Q13087 525 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 TRIM71Q2Q1W2 868 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 TIGD2Q4W5G0 525 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 PRAMEF20Q5VT98 475 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CIAPIN1Q6FI81 312 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 C8orf74Q6P047 294 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 BHLHB9Q6PI77 547 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 FAM180AQ6UWF9 173 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 USP43Q70EL4 1123 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 FRA10AC1Q70Z53 315 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 LRRC8DQ7L1W4 858 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 RD3Q7Z3Z2 195 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 RIBC1Q8N443 379 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 KDF1Q8NAX2 398 aaPredicted RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 OR10H4Q8NGA5 316 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 ZNF671Q8TAW3 534 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CELF1Q92879 486 aaKnown RBP5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CCDC120Q96HB5 630 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 CHID1Q9BWS9 393 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 OLFML3Q9NRN5 406 aa5.5□□□□□ -1.53
PTPN4-203ENST00000430976 TRAV34A0A0B4J273 112 aa5.49□□□□□ -1.53
PTPN4-203ENST00000430976 A6NHS1 94 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms