RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 NUP160Q12769 1436 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 CRTAMO95727 393 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 PCSK1P29120 753 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 CLK2P49760 499 aaKnown RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 IST1P53990 364 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 EZH2Q15910 746 aaKnown RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 LRRC20Q8TCA0 184 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 GPR108Q9NPR9 543 aa16.83■□□□□ 0.28
RIF1-204ENST00000430328 CNOT7Q9UIV1 285 aaKnown RBP16.83■□□□□ 0.28
RIF1-204ENST00000430328 PLEKHA8P1O95397 391 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 ME2P23368 584 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 PRR23BQ6ZRT6 265 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 USP38Q8NB14 1042 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 MTG1Q9BT17 334 aaPredicted RBP16.82■□□□□ 0.28
RIF1-204ENST00000430328 A1CFQ9NQ94 594 aaKnown RBP16.82■□□□□ 0.28
RIF1-204ENST00000430328 SLC2A3P11169 496 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 COMTP21964 271 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 ADGRE3Q9BY15 652 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 TFECO14948 347 aaPredicted RBP16.82■□□□□ 0.28
RIF1-204ENST00000430328 CEBPAP49715 358 aaPredicted RBP16.82■□□□□ 0.28
RIF1-204ENST00000430328 RBM43Q6ZSC3 357 aaKnown RBP16.82■□□□□ 0.28
RIF1-204ENST00000430328 FAM126BQ8IXS8 530 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 PRDM8Q9NQV8 689 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 TNRQ92752 1358 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 RNASEH1O60930 286 aaKnown RBP16.82■□□□□ 0.28
RIF1-204ENST00000430328 VPS4BO75351 444 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 DBTP11182 482 aaKnown RBP16.82■□□□□ 0.28
RIF1-204ENST00000430328 KCNJ1P48048 391 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 CDC42P60953 191 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 STARD3Q14849 445 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 BPIFB6Q8NFQ5 453 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 DLG3Q92796 817 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 BTBD9Q96Q07 612 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 TSPAN18Q96SJ8 248 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 AKAP1Q92667 903 aaKnown RBP eCLIP16.82■□□□□ 0.28
RIF1-204ENST00000430328 ZNF285Q96NJ3 590 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 SLC12A4Q9UP95 1085 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 C15orf38-AP3S2A0A0A6YYH1 394 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 PDXKO00764 312 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 LDOC1O95751 146 aaPredicted RBP16.82■□□□□ 0.28
RIF1-204ENST00000430328 APBA3O96018 575 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 ARPINQ7Z6K5 226 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 ZNF554Q86TJ5 538 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 REXO1L1PQ8IX06 675 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 LRRC40Q9H9A6 602 aa16.82■□□□□ 0.28
RIF1-204ENST00000430328 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 ZNF177Q13360 481 aaPredicted RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 TFDP3Q5H9I0 405 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ADSSL1Q8N142 457 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 DEPDC4Q8N2C3 294 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 FAM118BQ9BPY3 351 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 SLC38A7Q9NVC3 462 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 PLET1Q6UQ28 207 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 FMR1NBQ8N0W7 255 aaPredicted RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 OSBP2Q969R2 916 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 SLC6A15Q9H2J7 730 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ZNF221Q9UK13 617 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 UBQLN1Q9UMX0 589 aaKnown RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 BAZ2BQ9UIF8 2168 aaKnown RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 AGRPO00253 132 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 CPA3P15088 417 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ADSSP30520 456 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ADSLP30566 484 aaPredicted RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 MNDAP41218 407 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 FMO5P49326 533 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 KCNB1Q14721 858 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ZNF677Q86XU0 584 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 OR8H1Q8NGG4 311 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 FEZF2Q8TBJ5 459 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 C2CD2Q9Y426 696 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ITIH6Q6UXX5 1313 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 MAGEA12P43365 314 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 PRKAA2P54646 552 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 CYP4F2P78329 520 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 CYP4F3Q08477 520 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 SV2CQ496J9 727 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 TDRD1Q9BXT4 1180 aaKnown RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 FOXN3O00409 490 aaPredicted RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 FGFR2P21802 821 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 FGFR3P22607 806 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 CYP20A1Q6UW02 462 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ATP6V0D2Q8N8Y2 350 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 EPS8L3Q8TE67 593 aaKnown RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 PIK3R3Q92569 461 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 NEDD4P46934 1319 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ZW10O43264 779 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ATP5BP06576 529 aaKnown RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 HOXD10P28358 340 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 CDKL1Q00532 357 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 RIPK1Q13546 671 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 ARHGAP15Q53QZ3 475 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 FOXP4Q8IVH2 680 aaPredicted RBP16.81■□□□□ 0.28
RIF1-204ENST00000430328 IKZF3Q9UKT9 509 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 A0A1W2PP64 1363 aa16.81■□□□□ 0.28
RIF1-204ENST00000430328 OR5F1O95221 314 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 ROR2Q01974 943 aaKnown RBP16.8■□□□□ 0.28
RIF1-204ENST00000430328 C10orf120Q5SQS8 335 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 ZNF621Q6ZSS3 439 aa16.8■□□□□ 0.28
RIF1-204ENST00000430328 ARMC8Q8IUR7 673 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms