RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 MYO6Q9UM54 1294 aa17.66■□□□□ 0.42
UBE3D-204ENST00000430071 GOLGA6L7A0A1B0GV03 622 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 PRR5-ARHGAP8B1AHC4 643 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 HOXB2P14652 356 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 NTSR1P30989 418 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 ARHGAP8P85298 464 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 CREB5Q02930 508 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 MEA1Q16626 185 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 HSF5Q4G112 596 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-204ENST00000430071 TAF3Q5VWG9 929 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 TMEM215Q68D42 235 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 IRF2BP2Q7Z5L9 587 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 SCUBE3Q8IX30 993 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 SCML4Q8N228 414 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 RNF139Q8WU17 664 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 PIWIL1Q96J94 861 aaKnown RBP17.65■□□□□ 0.42
UBE3D-204ENST00000430071 POLMQ9NP87 494 aaPredicted RBP17.65■□□□□ 0.42
UBE3D-204ENST00000430071 ABCC13Q9NSE7 274 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 BCCIPQ9P287 314 aaKnown RBP eCLIP17.65■□□□□ 0.42
UBE3D-204ENST00000430071 CAPN11Q9UMQ6 739 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 PCDHGC3Q9UN70 934 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 ZNF510Q9Y2H8 683 aa17.65■□□□□ 0.42
UBE3D-204ENST00000430071 BCLAF3A2AJT9 711 aaKnown RBP17.64■□□□□ 0.41
UBE3D-204ENST00000430071 PATE3B3GLJ2 98 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 GFRA2O00451 464 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 LTFP02788 710 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 CHRNB2P17787 502 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 CASP14P31944 242 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 CHKAP35790 457 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 RPL34P49207 117 aaKnown RBP17.64■□□□□ 0.41
UBE3D-204ENST00000430071 MSANTD2Q6P1R3 559 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 PASD1Q8IV76 773 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 PGBD3Q8N328 593 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 CPXM2Q8N436 756 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 SORCS1Q8WY21 1168 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 PLD4Q96BZ4 506 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 IQCDQ96DY2 449 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 MYEOVQ96EZ4 313 aa17.64■□□□□ 0.41
UBE3D-204ENST00000430071 OLA1Q9NTK5 396 aaKnown RBP17.64■□□□□ 0.41
UBE3D-204ENST00000430071 HBS1LQ9Y450 684 aaKnown RBP17.64■□□□□ 0.41
UBE3D-204ENST00000430071 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.64■□□□□ 0.41
UBE3D-204ENST00000430071 NYNRINQ9P2P1 1898 aaKnown RBP17.64■□□□□ 0.41
UBE3D-204ENST00000430071 DOCK9Q9BZ29 2069 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 MMEP08473 750 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 FERP16591 822 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 HOXD9P28356 352 aaPredicted RBP17.63■□□□□ 0.41
UBE3D-204ENST00000430071 KRT9P35527 623 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 ZBED6P86452 979 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 ELF2Q15723 593 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 RFWD3Q6PCD5 774 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 ARMCX6Q7L4S7 300 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 TMEFF1Q8IYR6 380 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 CHPFQ8IZ52 775 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 WDTC1Q8N5D0 677 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 DEFB119Q8N690 84 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 WFDC5Q8TCV5 224 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 KCNV2Q8TDN2 545 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 IPO4Q8TEX9 1081 aaKnown RBP17.63■□□□□ 0.41
UBE3D-204ENST00000430071 DDI1Q8WTU0 396 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 MRFAP1L1Q96HT8 127 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 HSFY1Q96LI6 401 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 ST7Q9NRC1 585 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 AIPL1Q9NZN9 384 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 NAALADL1Q9UQQ1 740 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 SLC27A6Q9Y2P4 619 aa17.63■□□□□ 0.41
UBE3D-204ENST00000430071 LUC7L2Q9Y383 392 aaKnown RBP17.63■□□□□ 0.41
UBE3D-204ENST00000430071 SLC30A4O14863 429 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 ALDH1A2O94788 518 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 RHOBTB1O94844 696 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 IGLV3-27P01718 113 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 NDUFV2P19404 249 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 SLC6A4P31645 630 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 PTGER3P43115 390 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 DHPSP49366 369 aaPredicted RBP17.62■□□□□ 0.41
UBE3D-204ENST00000430071 PITX1P78337 314 aaPredicted RBP17.62■□□□□ 0.41
UBE3D-204ENST00000430071 FMO1Q01740 532 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 CDR2Q01850 454 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 TBX2Q13207 712 aaPredicted RBP17.62■□□□□ 0.41
UBE3D-204ENST00000430071 ASIC2Q16515 512 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 PREPLQ4J6C6 727 aaPredicted RBP17.62■□□□□ 0.41
UBE3D-204ENST00000430071 AASDHQ4L235 1098 aaPredicted RBP17.62■□□□□ 0.41
UBE3D-204ENST00000430071 SFMBT2Q5VUG0 894 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 SYPL2Q5VXT5 272 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 NADSYN1Q6IA69 706 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 TMC6Q7Z403 805 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 ADAM32Q8TC27 787 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 NETO1Q8TDF5 533 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 IRGQQ8WZA9 623 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 GABRG3Q99928 467 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 SLC4A5Q9BY07 1137 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 LHX5Q9H2C1 402 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 CALCOCO1Q9P1Z2 691 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 STON1Q9Y6Q2 735 aa17.62■□□□□ 0.41
UBE3D-204ENST00000430071 E5RJQ4 531 aa17.61■□□□□ 0.41
UBE3D-204ENST00000430071 PAPSS1O43252 624 aaPredicted RBP17.61■□□□□ 0.41
UBE3D-204ENST00000430071 IL12RB1P42701 662 aa17.61■□□□□ 0.41
UBE3D-204ENST00000430071 TRIM14Q14142 442 aa17.61■□□□□ 0.41
UBE3D-204ENST00000430071 TAF5Q15542 800 aa17.61■□□□□ 0.41
UBE3D-204ENST00000430071 NUDT18Q6ZVK8 323 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms