RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 MAP7D3Q8IWC1 876 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 FGF13Q92913 245 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 AZIN2Q96A70 460 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 ZSWIM3Q96MP5 696 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 MAGEB5Q9BZ81 275 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 OSBPL2Q9H1P3 480 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 TDP1Q9NUW8 608 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 GRXCR2A6NFK2 248 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 SRGAP2O75044 1071 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 COPS2P61201 443 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 ZNF211Q13398 564 aaPredicted RBP17.67■□□□□ 0.42
LINC00887-203ENST00000429578 PPP6R3Q5H9R7 873 aaPredicted RBP17.67■□□□□ 0.42
LINC00887-203ENST00000429578 ACBD5Q5T8D3 534 aaPredicted RBP17.67■□□□□ 0.42
LINC00887-203ENST00000429578 GET4Q7L5D6 327 aaPredicted RBP17.67■□□□□ 0.42
LINC00887-203ENST00000429578 VSIG1Q86XK7 387 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 DDX42Q86XP3 938 aaKnown RBP eCLIP17.67■□□□□ 0.42
LINC00887-203ENST00000429578 CCDC50Q8IVM0 306 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 PYROXD2Q8N2H3 581 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 COG1Q8WTW3 980 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 USP13Q92995 863 aaPredicted RBP17.67■□□□□ 0.42
LINC00887-203ENST00000429578 RNF25Q96BH1 459 aaPredicted RBP17.67■□□□□ 0.42
LINC00887-203ENST00000429578 C1orf74Q96LT6 269 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 SMG9Q9H0W8 520 aaKnown RBP17.67■□□□□ 0.42
LINC00887-203ENST00000429578 PCDH18Q9HCL0 1135 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 GDE1Q9NZC3 331 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 CD207Q9UJ71 328 aa17.67■□□□□ 0.42
LINC00887-203ENST00000429578 NUP205Q92621 2012 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 MYOFQ9NZM1 2061 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 C3orf70A6NLC5 250 aaPredicted RBP17.66■□□□□ 0.42
LINC00887-203ENST00000429578 PI4K2BG5E9Z4 385 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 URI1O94763 535 aaPredicted RBP17.66■□□□□ 0.42
LINC00887-203ENST00000429578 KLKB1P03952 638 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 CD48P09326 243 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 IRF1P10914 325 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 CORO1AP31146 461 aaKnown RBP17.66■□□□□ 0.42
LINC00887-203ENST00000429578 SEMA3BQ13214 749 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 DPYSL3Q14195 570 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 KRT81Q14533 505 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 SEL1L2Q5TEA6 688 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 ZSCAN18Q8TBC5 510 aaPredicted RBP17.66■□□□□ 0.42
LINC00887-203ENST00000429578 NECTIN4Q96NY8 510 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 KCTD15Q96SI1 283 aaPredicted RBP17.66■□□□□ 0.42
LINC00887-203ENST00000429578 CALN1Q9BXU9 219 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 DCLK3Q9C098 648 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 SIK2Q9H0K1 926 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 OR12D3Q9UGF7 316 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 XPO7Q9UIA9 1087 aaKnown RBP17.66■□□□□ 0.42
LINC00887-203ENST00000429578 FAM50BQ9Y247 325 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 HS3ST4Q9Y661 456 aa17.66■□□□□ 0.42
LINC00887-203ENST00000429578 KIF26AQ9ULI4 1882 aaPredicted RBP17.66■□□□□ 0.42
LINC00887-203ENST00000429578 LEFTY2O00292 366 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 ZNF185O15231 689 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 GREM1O60565 184 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 CETN2P41208 172 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 CDKN2BP42772 138 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 SLC11A2P49281 568 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 ZNF135P52742 658 aaPredicted RBP17.65■□□□□ 0.42
LINC00887-203ENST00000429578 MLLT6P55198 1093 aaPredicted RBP17.65■□□□□ 0.42
LINC00887-203ENST00000429578 NRG1Q02297 640 aaPredicted RBP17.65■□□□□ 0.42
LINC00887-203ENST00000429578 CLUL1Q15846 466 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 TAZQ16635 292 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 TFDP3Q5H9I0 405 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 MS4A13Q5J8X5 152 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 PIK3R6Q5UE93 754 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 AADACL2Q6P093 401 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 MFSD7Q6UXD7 560 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 SPOCD1Q6ZMY3 1216 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 DENND1CQ8IV53 801 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 ARID3BQ8IVW6 561 aaPredicted RBP17.65■□□□□ 0.42
LINC00887-203ENST00000429578 TSC1Q92574 1164 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 WBP2Q969T9 261 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 ZNF670Q9BS34 389 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 RCOR3Q9P2K3 495 aaPredicted RBP17.65■□□□□ 0.42
LINC00887-203ENST00000429578 LSM7Q9UK45 103 aaKnown RBP17.65■□□□□ 0.42
LINC00887-203ENST00000429578 CCL26Q9Y258 94 aa17.65■□□□□ 0.42
LINC00887-203ENST00000429578 ZNF487B1APH4 448 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 CEP104O60308 925 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 ACSL4O60488 711 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 PRAMEF12O95522 483 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 LATS1O95835 1130 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 TCF3P15923 654 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 IL4RP24394 825 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 PTPN7P35236 360 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 PPP2R5EQ16537 467 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 HTR3DQ70Z44 454 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 RASGEF1CQ8N431 466 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 SH3RF2Q8TEC5 729 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 SUSD6Q92537 303 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 POMKQ9H5K3 350 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 CFAP97Q9P2B7 532 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 STOML2Q9UJZ1 356 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 AGO1Q9UL18 857 aaKnown RBP17.64■□□□□ 0.41
LINC00887-203ENST00000429578 CDH7Q9ULB5 785 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 SH3BP1Q9Y3L3 701 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 FAM72CH0Y354 149 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 CREB3O43889 395 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 ARL4AP40617 200 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 TUBB2AQ13885 445 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 FAM72AQ5TYM5 149 aa17.64■□□□□ 0.41
LINC00887-203ENST00000429578 NADSYN1Q6IA69 706 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms