RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 SLC11A2P49281 568 aa18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 RPS24P62847 133 aaKnown RBP18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 FKBP15Q5T1M5 1219 aa18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 OR6B2Q6IFH4 312 aa18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 NUDT18Q6ZVK8 323 aa18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 KIAA0907Q7Z7F0 614 aaPredicted RBP18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 ADIPOR2Q86V24 386 aa18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 BPIFA3Q9BQP9 254 aa18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 TRIM62Q9BVG3 475 aa18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 SLC6A17Q9H1V8 727 aa18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 THAP10Q9P2Z0 257 aaPredicted RBP18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 MBD1Q9UIS9 605 aaPredicted RBP18.79■□□□□ 0.6
SSR4P1-202ENST00000429427 KCNU1A8MYU2 1149 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 TBL1XO60907 577 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 DAB1O75553 588 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 EPN2O95208 641 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 SOX5P35711 763 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 P2RY2P41231 377 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 GABRB2P47870 512 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 ZNF445P59923 1031 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 NOMO3P69849 1222 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 FMO1Q01740 532 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 SLC6A3Q01959 620 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 CCDC6Q16204 474 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 MAP7D1Q3KQU3 841 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 MS4A13Q5J8X5 152 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 EFHC1Q5JVL4 640 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 TRNP1Q6NT89 227 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 TMEM35BQ8NCS4 154 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 ZNF397Q8NF99 534 aaPredicted RBP18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 IPO4Q8TEX9 1081 aaKnown RBP18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 RMDN1Q96DB5 314 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 NOX5Q96PH1 765 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 ERGIC2Q96RQ1 377 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 POLMQ9NP87 494 aaPredicted RBP18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 CD93Q9NPY3 652 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 ABCB8Q9NUT2 735 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 ELOVL2Q9NXB9 296 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 STON1Q9Y6Q2 735 aa18.78■□□□□ 0.6
SSR4P1-202ENST00000429427 I6L893 689 aaPredicted RBP18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 TEX33O43247 280 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 NDUFV2P19404 249 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 PRKCHP24723 683 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 CD70P32970 193 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 UBXN1Q04323 297 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 ZNF234Q14588 700 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 USP39Q53GS9 565 aaKnown RBP18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 MPP7Q5T2T1 576 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 NAA35Q5VZE5 725 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 PMS2CLQ68D20 193 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 XYLT1Q86Y38 959 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 CFAP52Q8N1V2 620 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 CPA5Q8WXQ8 436 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 PRMT1Q99873 361 aaKnown RBP18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 ARRDC1-AS1Q9H2J1 176 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 FAM204AQ9H8W3 233 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 ANLNQ9NQW6 1124 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 SEMA4GQ9NTN9 838 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 DDIT4Q9NX09 232 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 GGA2Q9UJY4 613 aa18.77■□□□□ 0.6
SSR4P1-202ENST00000429427 SYNJ2BP-COX16A0A087WUM0 186 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 ALDH1A2O94788 518 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 LSM8O95777 96 aaKnown RBP18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 TPM2P07951 284 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 CDR2Q01850 454 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 IQCB1Q15051 598 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 EIF4HQ15056 248 aaKnown RBP18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 PTPRNQ16849 979 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 KLHL40Q2TBA0 621 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 FUT11Q495W5 492 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 FSCBQ5H9T9 825 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 PLA2G2CQ5R387 149 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 RAP1GAP2Q684P5 730 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 HJURPQ8NCD3 748 aaPredicted RBP18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 LOXL4Q96JB6 756 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 PCDHB18PQ96TA0 734 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 IRX2Q9BZI1 471 aaPredicted RBP18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 CIPCQ9C0C6 399 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 SMOC1Q9H4F8 434 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 SYNCQ9H7C4 482 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 COX16Q9P0S2 106 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 STIM2Q9P246 746 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 BCCIPQ9P287 314 aaKnown RBP eCLIP18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 INTS6Q9UL03 887 aaKnown RBP18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 USP18Q9UMW8 372 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 CEP83Q9Y592 693 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 PLXND1Q9Y4D7 1925 aa18.76■□□□□ 0.59
SSR4P1-202ENST00000429427 LRP3O75074 770 aa18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 APOEP02649 317 aa18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 CYP1A1P04798 512 aaPredicted RBP18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 PABPC1P11940 636 aaKnown RBP18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 CDK11BP21127 795 aaKnown RBP18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 TACR2P21452 398 aa18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 CDK17Q00537 523 aa18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 CSRP2Q16527 193 aa18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 MMS22LQ6ZRQ5 1243 aa18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 CHST9Q7L1S5 443 aa18.75■□□□□ 0.59
SSR4P1-202ENST00000429427 ZDHHC17Q8IUH5 632 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms