RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CCDC14Q49A88 953 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 BOLA3Q53S33 107 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 UNC5AQ6ZN44 842 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 COLGALT1Q8NBJ5 622 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 STKLD1Q8NE28 680 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 MCUQ8NE86 351 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 FBXO27Q8NI29 283 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 SLC44A1Q8WWI5 657 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 MOCOSQ96EN8 888 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 VMP1Q96GC9 406 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 TMPRSS4Q9NRS4 437 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 PRMT7Q9NVM4 692 aaPredicted RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 ZNF358Q9NW07 568 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 WBP1LQ9NX94 342 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 MFHAS1Q9Y4C4 1052 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 TIMM13Q9Y5L4 95 aaPredicted RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 PPP2R3BQ9Y5P8 575 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 TRIM64CA6NLI5 447 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 CITO14578 2027 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 TGFB3P10600 412 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 ALADP13716 330 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 GOT1P17174 413 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 ARF4P18085 180 aaPredicted RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 PGGT1BP53609 377 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 FKBP1BP68106 108 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 SEPT6Q14141 434 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 NOMO1Q15155 1222 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 PARP6Q2NL67 630 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 WASHC2DQ5SRD0 308 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 AP1ARQ63HQ0 302 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 RIPOR1Q6ZS17 1223 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 EXT2Q93063 718 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 ZBED3Q96IU2 234 aaPredicted RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 OSMRQ99650 979 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 MRPL45Q9BRJ2 306 aaKnown RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 GOLGA2P5Q9HBQ8 144 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 ETAA1Q9NY74 926 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 ERAP1Q9NZ08 941 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 PGAP2Q9UHJ9 254 aa8.3□□□□□ -1.08
HPS4-205ENST00000429411 BARX2Q9UMQ3 279 aaPredicted RBP8.3□□□□□ -1.08
HPS4-205ENST00000429411 TPP1O14773 563 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 PPEF2O14830 753 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 HBP1O60381 514 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 MT-CO1P00395 513 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 SRGAP2BP0DMP2 458 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 ENO3P13929 434 aaPredicted RBP8.29□□□□□ -1.08
HPS4-205ENST00000429411 IL4RP24394 825 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 CACNA2D1P54289 1103 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 SNX16P57768 344 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 INHBEP58166 350 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 MRPS35P82673 323 aaKnown RBP8.29□□□□□ -1.08
HPS4-205ENST00000429411 USP4Q13107 963 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 PAN2Q504Q3 1202 aaKnown RBP8.29□□□□□ -1.08
HPS4-205ENST00000429411 LDLRAD1Q5T700 205 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 FASTKD5Q7L8L6 764 aaKnown RBP8.29□□□□□ -1.08
HPS4-205ENST00000429411 TDRPQ86YL5 185 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 REPS2Q8NFH8 660 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 PCDH19Q8TAB3 1148 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 AZIN2Q96A70 460 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 C18orf25Q96B23 403 aaPredicted RBP8.29□□□□□ -1.08
HPS4-205ENST00000429411 MARK4Q96L34 752 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 PPCSQ9HAB8 311 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 PCDH18Q9HCL0 1135 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 PDLIM7Q9NR12 457 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 PNPOQ9NVS9 261 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 MKS1Q9NXB0 559 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 SIX4Q9UIU6 781 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 PIN4Q9Y237 131 aaKnown RBP8.29□□□□□ -1.08
HPS4-205ENST00000429411 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.29□□□□□ -1.08
HPS4-205ENST00000429411 M0QYT0 321 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 IL18RAPO95256 599 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 GARSP41250 739 aaKnown RBP8.29□□□□□ -1.08
HPS4-205ENST00000429411 TNFAIP2Q03169 654 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 POU5F1BQ06416 359 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 ITKQ08881 620 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 TLDC1Q6P9B6 456 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 TRIM74Q86UV6 250 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 TRIM73Q86UV7 250 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 IQCF2Q8IXL9 164 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 DEFB107AQ8IZN7 70 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 DNERQ8NFT8 737 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 GSDMBQ8TAX9 411 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 FGD4Q96M96 766 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 DPEP3Q9H4B8 488 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 CAB39LQ9H9S4 337 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 SAR1AQ9NR31 198 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 SETD4Q9NVD3 440 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 TLK1Q9UKI8 766 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 SLC39A10Q9ULF5 831 aa8.29□□□□□ -1.08
HPS4-205ENST00000429411 FNDC3AQ9Y2H6 1198 aaKnown RBP8.29□□□□□ -1.08
HPS4-205ENST00000429411 FKTNO75072 461 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 ETS2P15036 469 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 ATP6V1C1P21283 382 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 PSMB4P28070 264 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 SLC1A6P48664 564 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 BTKQ06187 659 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 RALGPS1Q5JS13 557 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 ANO7Q6IWH7 933 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 SLC30A9Q6PML9 568 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 SPATA6LQ8N4H0 392 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms