RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SLC47A2Q86VL8 602 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ATG16L2Q8NAA4 619 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ATXN2LQ8WWM7 1075 aaKnown RBP13.09□□□□□ -0.31
LDB3-205ENST00000429277 CPB2Q96IY4 423 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 NSMCE2Q96MF7 247 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 TMEM237Q96Q45 408 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 KLHL3Q9UH77 587 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 CHORDC1Q9UHD1 332 aaPredicted RBP13.09□□□□□ -0.31
LDB3-205ENST00000429277 FAM205AQ6ZU69 1335 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 PTPRMP28827 1452 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 H7C0S8 307 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 INSRRP14616 1297 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ATP6V1B2P21281 511 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 YWHAQP27348 245 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 GLRBP48167 497 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 RARRES1P49788 294 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 SGCGQ13326 291 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 WASHC2DQ5SRD0 308 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 RMND5BQ96G75 393 aaPredicted RBP13.09□□□□□ -0.31
LDB3-205ENST00000429277 MAML3Q96JK9 1138 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 NFKBIZQ9BYH8 718 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 OSBPL6Q9BZF3 934 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 PHACTR1Q9C0D0 580 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 SESN1Q9Y6P5 492 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ZNF682O95780 498 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 HERVK_113P62684 666 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 HDDC2Q7Z4H3 204 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 CCDC103Q8IW40 242 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ZNF614Q8N883 585 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 LPCAT1Q8NF37 534 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 FUT8Q9BYC5 575 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 CYP4F12Q9HCS2 524 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 ATP13A1Q9HD20 1204 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 HAO1Q9UJM8 370 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 CNTNAP2Q9UHC6 1331 aa13.09□□□□□ -0.31
LDB3-205ENST00000429277 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.31
LDB3-205ENST00000429277 MAGEA10P43363 369 aaPredicted RBP13.08□□□□□ -0.31
LDB3-205ENST00000429277 NFIL3Q16649 462 aa13.08□□□□□ -0.31
LDB3-205ENST00000429277 NT5DC3Q86UY8 548 aa13.08□□□□□ -0.31
LDB3-205ENST00000429277 KCNMB4Q86W47 210 aa13.08□□□□□ -0.31
LDB3-205ENST00000429277 EIF1ADQ8N9N8 165 aaKnown RBP13.08□□□□□ -0.31
LDB3-205ENST00000429277 SLC5A5Q92911 643 aa13.08□□□□□ -0.31
LDB3-205ENST00000429277 APOPT1Q96IL0 206 aa13.08□□□□□ -0.31
LDB3-205ENST00000429277 OSMRQ99650 979 aa13.08□□□□□ -0.31
LDB3-205ENST00000429277 UGT2B28Q9BY64 529 aa13.08□□□□□ -0.31
LDB3-205ENST00000429277 L1RE1Q9UN81 338 aa13.08□□□□□ -0.31
LDB3-205ENST00000429277 SLIT1O75093 1534 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 DIP2AQ14689 1571 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 GRK4P32298 578 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 AGKQ53H12 422 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 EID3Q8N140 333 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 CROTQ9UKG9 612 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 CABYRO75952 493 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 GSTM1P09488 218 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 ATP6V1B1P15313 513 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 SARSP49591 514 aaKnown RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 CDK16Q00536 496 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 VAC14Q08AM6 782 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 PABPC1LQ4VXU2 614 aaKnown RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 SLC44A2Q8IWA5 706 aaPredicted RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 BHMTQ93088 406 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 ARHGAP28Q9P2N2 729 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 FAM153AQ9UHL3 310 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 TNPO3Q9Y5L0 923 aaKnown RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 A0A087X1B8 175 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 CD3EAPO15446 510 aaKnown RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 MAPK8P45983 427 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 SCTRP47872 440 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 NDST1P52848 882 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 GSTA3Q16772 222 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 PAN2Q504Q3 1202 aaKnown RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 PALB2Q86YC2 1186 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 ACTRT2Q8TDY3 377 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 POP5Q969H6 163 aaKnown RBP13.08□□□□□ -0.32
LDB3-205ENST00000429277 ADPRHL2Q9NX46 363 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.08□□□□□ -0.32
LDB3-205ENST00000429277 NFASCO94856 1347 aa13.08□□□□□ -0.32
LDB3-205ENST00000429277 FGF10O15520 208 aaPredicted RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 AMHP03971 560 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 SLC2A4P14672 509 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 RAP1GAPP47736 663 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 ITGA1P56199 1179 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 SHROOM1Q2M3G4 852 aaPredicted RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 TMEM119Q4V9L6 283 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 TMEM26Q6ZUK4 368 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 UNC93AQ86WB7 457 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 GLMNQ92990 594 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 MAGEB10Q96LZ2 347 aaPredicted RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 APOL4Q9BPW4 351 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 COPG2Q9UBF2 871 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 NDUFAF1Q9Y375 327 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 WBP4O75554 376 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms