RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PPM1LQ5SGD2 360 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 HECTD3Q5T447 861 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 MANEALQ5VSG8 457 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 TXNDC8Q6A555 127 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 NADSYN1Q6IA69 706 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 CCDC137Q6PK04 289 aaKnown RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 CCDC149Q6ZUS6 474 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 SND1Q7KZF4 910 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMC6-204ENST00000428868 DDX42Q86XP3 938 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMC6-204ENST00000428868 DEFB123Q8N688 67 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 C12orf76Q8N812 135 aaPredicted RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 PDZD8Q8NEN9 1154 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 ADAMTS19Q8TE59 1207 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 CASKIN2Q8WXE0 1202 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 ZNF707Q96C28 371 aaPredicted RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 CYP2S1Q96SQ9 504 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 NAP1L3Q99457 506 aaPredicted RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 CORO1BQ9BR76 489 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 SIK2Q9H0K1 926 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 LRRC19Q9H756 370 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 SLC28A3Q9HAS3 691 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 TRPC7Q9HCX4 862 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 SMPD4Q9NXE4 827 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 DNMT3BQ9UBC3 853 aaKnown RBP9.19□□□□□ -0.94
SMC6-204ENST00000428868 MAFFQ9ULX9 164 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 TLR6Q9Y2C9 796 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 HS3ST4Q9Y661 456 aa9.19□□□□□ -0.94
SMC6-204ENST00000428868 GOLGA6L10A0A0M3HER8 536 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 A0A1W2PRU2 124 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 APOL1O14791 398 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 LINC01565O15544 149 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 LIASO43766 372 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 TJP3O95049 919 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 GLP2RO95838 553 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 F9P00740 461 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 KLKB1P03952 638 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 SLC6A4P31645 630 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 CCR1P32246 355 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 CETN2P41208 172 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 GDF10P55107 478 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 TPI1P60174 286 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 DR1Q01658 176 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 NOMO1Q15155 1222 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 TRIP13Q15645 432 aaPredicted RBP9.18□□□□□ -0.94
SMC6-204ENST00000428868 OASLQ15646 514 aaKnown RBP9.18□□□□□ -0.94
SMC6-204ENST00000428868 CCNG2Q16589 344 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 DUSP6Q16828 381 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 MS4A13Q5J8X5 152 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 BRMS1LQ5PSV4 323 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 EYSQ5T1H1 3165 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 RAP1GAP2Q684P5 730 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 RFX8Q6ZV50 586 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 Q7L0L9 218 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 ITIH5Q86UX2 942 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 CIR1Q86X95 450 aaPredicted RBP9.18□□□□□ -0.94
SMC6-204ENST00000428868 JAMLQ86YT9 394 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
SMC6-204ENST00000428868 ZNF683Q8IZ20 524 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 PIAS4Q8N2W9 510 aaPredicted RBP9.18□□□□□ -0.94
SMC6-204ENST00000428868 NPWQ8N729 165 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 ARL14EPQ8N8R7 260 aaPredicted RBP9.18□□□□□ -0.94
SMC6-204ENST00000428868 RIN3Q8TB24 985 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 SLC35B2Q8TB61 432 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 SHKBP1Q8TBC3 707 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 TIFAQ96CG3 184 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 KLF16Q9BXK1 252 aaPredicted RBP9.18□□□□□ -0.94
SMC6-204ENST00000428868 PARD6BQ9BYG5 372 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 TRIM31Q9BZY9 425 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
SMC6-204ENST00000428868 OSBPL2Q9H1P3 480 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 NEUROG2Q9H2A3 272 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 SLITRK6Q9H5Y7 841 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 OLA1Q9NTK5 396 aaKnown RBP9.18□□□□□ -0.94
SMC6-204ENST00000428868 NDFIP2Q9NV92 336 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 MPP6Q9NZW5 540 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 OR12D3Q9UGF7 316 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 PCYOX1Q9UHG3 505 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 EFR3BQ9Y2G0 817 aa9.18□□□□□ -0.94
SMC6-204ENST00000428868 TICRRQ7Z2Z1 1910 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 ZNF487B1APH4 448 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 E9PAM4 449 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 H3BRJ5 948 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 APOC4-APOC2K7ER74 178 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 TRDMT1O14717 391 aaKnown RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 STC2O76061 302 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 OLFM2O95897 454 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 APOC2P02655 101 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 RHOP08100 348 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 ZSCAN5DPP0CG00 497 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 SRGAP2BP0DMP2 458 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 MBL2P11226 248 aaPredicted RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 VAV1P15498 845 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 ERCC2P18074 760 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 HOXC13P31276 330 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 CHRNA3P32297 505 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 ATP5C1P36542 298 aaKnown RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 ARL4AP40617 200 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 FNTAP49354 379 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms