RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 KRT17Q04695 432 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 RCN1Q15293 331 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 RAB30Q15771 203 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 USP41Q3LFD5 358 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 C3orf62Q6ZUJ4 267 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 LIMS2Q7Z4I7 341 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 FAM71AQ8IYT1 594 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 VPS52Q8N1B4 723 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 SLC4A11Q8NBS3 891 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 AUTS2Q8WXX7 1259 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 ARHGEF2Q92974 986 aaKnown RBP11.8□□□□□ -0.52
CECR3-201ENST00000428828 DGCR14Q96DF8 476 aaKnown RBP11.8□□□□□ -0.52
CECR3-201ENST00000428828 TMEM209Q96SK2 561 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 TTPALQ9BTX7 342 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 NT5C1AQ9BXI3 368 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 PITPNM3Q9BZ71 974 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 FAM49BQ9NUQ9 324 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 ZDHHC7Q9NXF8 308 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 ANGPTL2Q9UKU9 493 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 RWDD3Q9Y3V2 267 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 TRIOBPQ9H2D6 2365 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 A0A087X0T9 212 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 DDX3XO00571 662 aaKnown RBP eCLIP11.8□□□□□ -0.52
CECR3-201ENST00000428828 THAP12O43422 761 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 AP1G1O43747 822 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 CCDC22O60826 627 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 SOD2P04179 222 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 CYP11A1P05108 521 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 OR4Q2P0C623 313 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 FAM228BP0C875 321 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 RPL17P18621 184 aaKnown RBP11.8□□□□□ -0.52
CECR3-201ENST00000428828 TYMPP19971 482 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 TAC1P20366 129 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 PAX3P23760 479 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 EPHB2P29323 1055 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 CRABP2P29373 138 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 LHX1P48742 406 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 GLUD2P49448 558 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 DNA2P51530 1060 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 ARPP19P56211 112 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 PLOD1Q02809 727 aaPredicted RBP11.8□□□□□ -0.52
CECR3-201ENST00000428828 KLHL30Q0D2K2 578 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 CYLC2Q14093 348 aaPredicted RBP11.8□□□□□ -0.52
CECR3-201ENST00000428828 CTXN3Q4LDR2 81 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 ACAD11Q709F0 780 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 PEX26Q7Z412 305 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 DDX53Q86TM3 631 aaKnown RBP11.8□□□□□ -0.52
CECR3-201ENST00000428828 THEM5Q8N1Q8 247 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 C12orf29Q8N999 325 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 OR10T2Q8NGX3 314 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 SLC20A1Q8WUM9 679 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 ARNTL2Q8WYA1 636 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 TMEM176AQ96HP8 235 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 HEXIM2Q96MH2 286 aaKnown RBP11.8□□□□□ -0.52
CECR3-201ENST00000428828 RTP3Q9BQQ7 232 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 PRO3102Q9H379 93 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 SLC28A3Q9HAS3 691 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 SEPT11Q9NVA2 429 aaKnown RBP11.8□□□□□ -0.52
CECR3-201ENST00000428828 GRHL1Q9NZI5 618 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 LGALS13Q9UHV8 139 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 HAO1Q9UJM8 370 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 NENFQ9UMX5 172 aa11.8□□□□□ -0.52
CECR3-201ENST00000428828 MYO16Q9Y6X6 1858 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 CARNS1A5YM72 827 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 H0Y3Z8 333 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 GABRDO14764 452 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 CAPN9O14815 690 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 URODP06132 367 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 HNRNPCP07910 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
CECR3-201ENST00000428828 TARSP26639 723 aaKnown RBP11.79□□□□□ -0.52
CECR3-201ENST00000428828 STX2P32856 288 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 ZNF132P52740 706 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 IL9RQ01113 521 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 PTK2Q05397 1052 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 PSMD5Q16401 504 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 SLC44A4Q53GD3 710 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 MDH1BQ5I0G3 518 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 KIAA0319Q5VV43 1072 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 ZNF280DQ6N043 979 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 DAAM2Q86T65 1068 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 NT5DC3Q86UY8 548 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 TTC39CQ8N584 583 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 FBXO22Q8NEZ5 403 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 EPS8L3Q8TE67 593 aaKnown RBP11.79□□□□□ -0.52
CECR3-201ENST00000428828 HERC2P3Q9BVR0 1158 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 KRT82Q9NSB4 513 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 ETNK2Q9NVF9 386 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 RHBDL2Q9NX52 303 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 UTP6Q9NYH9 597 aaKnown RBP11.79□□□□□ -0.52
CECR3-201ENST00000428828 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
CECR3-201ENST00000428828 MYO7AQ13402 2215 aa11.79□□□□□ -0.52
CECR3-201ENST00000428828 CCDC162PA2VCL2 907 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 ASMTLO95671 621 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CCDC130P13994 396 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CYP11B1P15538 503 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 PORP16435 677 aaPredicted RBP11.78□□□□□ -0.52
CECR3-201ENST00000428828 ADARP55265 1226 aaKnown RBP11.78□□□□□ -0.52
CECR3-201ENST00000428828 XIAPP98170 497 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CDR2Q01850 454 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 IRF2BP2Q7Z5L9 587 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms