RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SLC1A1P43005 524 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 PTENP60484 403 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 HTRA4P83105 476 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-206ENST00000428680 GPS1Q13098 491 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 LINC00523Q86TU6 105 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 ATXN7L3BQ96GX2 97 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 MSANTD3Q96H12 275 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 LRCH3Q96II8 777 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 RAB6BQ9NRW1 208 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 VANGL2Q9ULK5 521 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 ARHGAP26Q9UNA1 814 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 SLC27A6Q9Y2P4 619 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 ALPK3Q96L96 1907 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 GPC1P35052 558 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 BLKP51451 505 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 ANTXR2P58335 489 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 SDHAF4Q5VUM1 108 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 FAM47EQ6ZV65 393 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 HDXQ7Z353 690 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 TAF8Q7Z7C8 310 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 BRSK2Q8IWQ3 736 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 E2F7Q96AV8 911 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 NUSAP1Q9BXS6 441 aaKnown RBP7.44□□□□□ -1.22
CNOT4-206ENST00000428680 TM6SF2Q9BZW4 377 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 DPEP2Q9H4A9 486 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 PHPT1Q9NRX4 125 aaPredicted RBP7.44□□□□□ -1.22
CNOT4-206ENST00000428680 WWOXQ9NZC7 414 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 SEPT3Q9UH03 358 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 RUVBL2Q9Y230 463 aaKnown RBP7.44□□□□□ -1.22
CNOT4-206ENST00000428680 RIPK3Q9Y572 518 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 PCDHA13Q9Y5I0 950 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 ORC6Q9Y5N6 252 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 ZSWIM8A7E2V4 1837 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 FAM86B1E9PN63 330 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 MAN2B1O00754 1011 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 GJB5O95377 273 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 FAM86B2P0C5J1 330 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 DHX9Q08211 1270 aaKnown RBP7.44□□□□□ -1.22
CNOT4-206ENST00000428680 ANO7Q6IWH7 933 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 RASSF3Q86WH2 238 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 CLYBLQ8N0X4 340 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 TMC2Q8TDI7 906 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 ULBP1Q9BZM6 244 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 RBM22Q9NW64 420 aaKnown RBP eCLIP7.44□□□□□ -1.221e-7■■■■■ 31.6
CNOT4-206ENST00000428680 ABI3Q9P2A4 366 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 UVRAGQ9P2Y5 699 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 TSPAN16Q9UKR8 245 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 DNAJC16Q9Y2G8 782 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 USP20Q9Y2K6 914 aa7.44□□□□□ -1.22
CNOT4-206ENST00000428680 H3BNC9 293 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 VPS26AO75436 327 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 SUPT3HO75486 399 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 BMP10O95393 424 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 RPL17P18621 184 aaKnown RBP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 ARHGDIAP52565 204 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 NCALDP61601 193 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 ZNF200P98182 395 aaPredicted RBP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 SF3A3Q12874 501 aaKnown RBP eCLIP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 FAAH2Q6GMR7 532 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 DDIASQ8IXT1 998 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 SLC5A5Q92911 643 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 PRPF18Q99633 342 aaKnown RBP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 VCX3BQ9H321 246 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 IL17RBQ9NRM6 502 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 CPSF2Q9P2I0 782 aaKnown RBP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 ZNF711Q9Y462 761 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 SUPT3HB4E1H0 165 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 SOX1O00570 391 aaPredicted RBP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 B4GALT4O60513 344 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 FGF18O76093 207 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 JCHAINP01591 159 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 EIF2S1P05198 315 aaKnown RBP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 CA3P07451 260 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 PYGMP11217 842 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 SLC2A4P14672 509 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 ZNF445P59923 1031 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 DR1Q01658 176 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 WHAMMP3Q1A5X7 153 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 EOGTQ5NDL2 527 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 VSTM1Q6UX27 236 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 RCOR2Q8IZ40 523 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 C10orf53Q8N6V4 93 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 VPS37AQ8NEZ2 397 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 CCDC124Q96CT7 223 aaKnown RBP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 SIPA1Q96FS4 1042 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 NXF3Q9H4D5 531 aaKnown RBP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 RNF14Q9UBS8 474 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 CD207Q9UJ71 328 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 FBXL5Q9UKA1 691 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 ASB3Q9Y575 518 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 UBIAD1Q9Y5Z9 338 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 TARSL2A2RTX5 802 aaKnown RBP7.43□□□□□ -1.22
CNOT4-206ENST00000428680 PEX5P50542 639 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 STK4Q13043 487 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 PDGFRLQ15198 375 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 ZBTB41Q5SVQ8 909 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 TRIM59Q8IWR1 403 aa7.43□□□□□ -1.22
CNOT4-206ENST00000428680 TMEM192Q8IY95 271 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms