RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 HIST3H2AQ7L7L0 130 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 VGLL2Q8N8G2 317 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 TERB1Q8NA31 727 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 HIST1H2ACQ93077 130 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 AGPAT5Q9NUQ2 364 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 INTS13Q9NVM9 706 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF112Q9UJU3 913 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 AP4E1Q9UPM8 1137 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ALG6Q9Y672 507 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 WWP2O00308 870 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 TPST1O60507 370 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 SERPINB5P36952 375 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 GPR1P46091 355 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 CREMQ03060 361 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 EPC2Q52LR7 807 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ZNF618Q5T7W0 954 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 PACS1Q6VY07 963 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 SLC30A10Q6XR72 485 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 PEG10Q86TG7 708 aaKnown RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 DSELQ8IZU8 1212 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 SOCS4Q8WXH5 440 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 FAM163AQ96GL9 167 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 RSPH9Q9H1X1 276 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ATP13A1Q9HD20 1204 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 RRN3Q9NYV6 651 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 USP18Q9UMW8 372 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 A0A1W2PQJ5 194 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 PIPSLA2A3N6 862 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 NR5A2O00482 541 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 SLC9A3R1O14745 358 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ABCB1P08183 1280 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-208ENST00000428599 GRK2P25098 689 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 LSP1P33241 339 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 HNMTP50135 292 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 TKTL1P51854 596 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 PPATQ06203 517 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 KLC1Q07866 573 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 MARC1Q5VT66 337 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 KLHDC7AQ5VTJ3 777 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 METTL7BQ6UX53 244 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 CEP68Q76N32 757 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 FAM20CQ8IXL6 584 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 TRPC4APQ8TEL6 797 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 STARD8Q92502 1023 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 DPY30Q9C005 99 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 HDHD2Q9H0R4 259 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 COMMD8Q9NX08 183 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 ARHGAP28Q9P2N2 729 aa9.15□□□□□ -0.94
CTNND1-208ENST00000428599 SALL3Q9BXA9 1300 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 ANKRD65E5RJM6 399 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 TSPAN3O60637 253 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 RAMP2O60895 175 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 FCGR1AP12314 374 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 TLX1P31314 330 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-208ENST00000428599 NME5P56597 212 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 VGLL4Q14135 290 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 SPIDRQ14159 915 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 CNGA2Q16280 664 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 FAXCQ5TGI0 409 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 SEL1L3Q68CR1 1132 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 CDC73Q6P1J9 531 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 CXorf40AQ8TE69 158 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 ZNF473Q8WTR7 871 aaKnown RBP9.15□□□□□ -0.95
CTNND1-208ENST00000428599 ACSF2Q96CM8 615 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-208ENST00000428599 QRFPRQ96P65 431 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 CHP1Q99653 195 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 KCTD14Q9BQ13 255 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-208ENST00000428599 CYP3A43Q9HB55 503 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 TMEM51Q9NW97 253 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 DDX43Q9NXZ2 648 aaKnown RBP9.15□□□□□ -0.95
CTNND1-208ENST00000428599 VTI1BQ9UEU0 232 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 GPN3Q9UHW5 284 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-208ENST00000428599 ITGA11Q9UKX5 1188 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 DUSP12Q9UNI6 340 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 TNFSF13BQ9Y275 285 aa9.15□□□□□ -0.95
CTNND1-208ENST00000428599 HLA-DQA2P01906 255 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 ADORA2AP29274 412 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 TM4SF1P30408 202 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 TUFMP49411 452 aaKnown RBP9.14□□□□□ -0.95
CTNND1-208ENST00000428599 VAC14Q08AM6 782 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 ORC1Q13415 861 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 PEX6Q13608 980 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 SLC44A4Q53GD3 710 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 FAM171A1Q5VUB5 890 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 FKBP1CQ5VVH2 108 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 TTC23Q5W5X9 447 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 FBXL19Q6PCT2 694 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 ASZ1Q8WWH4 475 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 PANX3Q96QZ0 392 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 CYP4F12Q9HCS2 524 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 HMX1Q9NP08 348 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-208ENST00000428599 GTF3C4Q9UKN8 822 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 SF3B1O75533 1304 aaKnown RBP eCLIP9.14□□□□□ -0.955e-6■■■■■ 59.8
CTNND1-208ENST00000428599 MAGEB16A2A368 324 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 ZNF185O15231 689 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 MTRF1O75570 445 aaKnown RBP9.14□□□□□ -0.95
CTNND1-208ENST00000428599 MYBL2P10244 700 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 HPCAL1P37235 193 aa9.14□□□□□ -0.95
CTNND1-208ENST00000428599 TRAF2Q12933 501 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms