RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 LCP1P13796 627 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 CD19P15391 556 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 RGS7P49802 495 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 ZNF132P52740 706 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 PTPRNQ16849 979 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 KIF19Q2TAC6 998 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 MPPE1Q53F39 396 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 DCAF17Q5H9S7 520 aaPredicted RBP17.27■□□□□ 0.36
VARS-216ENST00000428445 KCNT1Q5JUK3 1230 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 TCERG1LQ5VWI1 586 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 RFWD3Q6PCD5 774 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 ADIPOR2Q86V24 386 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 TMA16Q96EY4 203 aaKnown RBP17.27■□□□□ 0.36
VARS-216ENST00000428445 SLC2A11Q9BYW1 496 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 TMEM245Q9H330 911 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 LRRC4Q9HBW1 653 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 TOR4AQ9NXH8 423 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 SNX11Q9Y5W9 270 aa17.27■□□□□ 0.36
VARS-216ENST00000428445 MUC22E2RYF6 1773 aaPredicted RBP17.26■□□□□ 0.35
VARS-216ENST00000428445 XPO1O14980 1071 aaKnown RBP17.26■□□□□ 0.35
VARS-216ENST00000428445 TIMM44O43615 452 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 EPB41P11171 864 aaKnown RBP17.26■□□□□ 0.35
VARS-216ENST00000428445 PRCPP42785 496 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 HARS2P49590 506 aaKnown RBP17.26■□□□□ 0.35
VARS-216ENST00000428445 PMS1P54277 932 aaKnown RBP17.26■□□□□ 0.35
VARS-216ENST00000428445 KRT85P78386 507 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 PNOCQ13519 176 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 CAMK2GQ13555 558 aaPredicted RBP17.26■□□□□ 0.35
VARS-216ENST00000428445 EIF4HQ15056 248 aaKnown RBP17.26■□□□□ 0.35
VARS-216ENST00000428445 TTC39CQ8N584 583 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 RHBDD1Q8TEB9 315 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 RNF139Q8WU17 664 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 ERCC4Q92889 916 aaPredicted RBP17.26■□□□□ 0.35
VARS-216ENST00000428445 MYEOVQ96EZ4 313 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 IPO9Q96P70 1041 aaKnown RBP17.26■□□□□ 0.35
VARS-216ENST00000428445 LHX5Q9H2C1 402 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 PRSS16Q9NQE7 514 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.26■□□□□ 0.35
VARS-216ENST00000428445 NFE2L3Q9Y4A8 694 aa17.26■□□□□ 0.35
VARS-216ENST00000428445 GOLGA4Q13439 2230 aaKnown RBP17.25■□□□□ 0.35
VARS-216ENST00000428445 CETN3O15182 167 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 SLC6A4P31645 630 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 CD70P32970 193 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 SLC8A3P57103 927 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 RPS14P62263 151 aaKnown RBP17.25■□□□□ 0.35
VARS-216ENST00000428445 CUL2Q13617 745 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 EDRF1Q3B7T1 1238 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 SGO2Q562F6 1265 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 CCDC157Q569K6 752 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 MBLAC2Q68D91 279 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 ANKRD40Q6AI12 368 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 CLEC4CQ8WTT0 213 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 TFAP2BQ92481 460 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 BIRC7Q96CA5 298 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 CCDC34Q96HJ3 373 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 STIM2Q9P246 746 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 GGA2Q9UJY4 613 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 PLA2G4CQ9UP65 541 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 APOBEC2Q9Y235 224 aaKnown RBP17.25■□□□□ 0.35
VARS-216ENST00000428445 GPSM3Q9Y4H4 160 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 ATP6V1DQ9Y5K8 247 aa17.25■□□□□ 0.35
VARS-216ENST00000428445 ANKRD11Q6UB99 2663 aaPredicted RBP17.25■□□□□ 0.35
VARS-216ENST00000428445 TRIM49BA6NDI0 452 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 RNF225M0QZC1 329 aaPredicted RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 TBL1XO60907 577 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 FSBPO95073 299 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 CER1O95813 267 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 PABPC1P11940 636 aaKnown RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 BCAT1P54687 386 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 IL9RQ01113 521 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 BST2Q10589 180 aaKnown RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 COL28A1Q2UY09 1125 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 PRAMEF14Q5SWL7 426 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 ADGRF1Q5T601 910 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 DBX2Q6ZNG2 339 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 KIAA0907Q7Z7F0 614 aaPredicted RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 GLRX5Q86SX6 157 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 BAHD1Q8TBE0 780 aaPredicted RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 HNRNPLLQ8WVV9 542 aaKnown RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 ZSWIM1Q9BR11 485 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 SCAND2PQ9GZW5 306 aaPredicted RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 CCDC86Q9H6F5 360 aaKnown RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 TM9SF3Q9HD45 589 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 OLA1Q9NTK5 396 aaKnown RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 ANKRD6Q9Y2G4 727 aa17.24■□□□□ 0.35
VARS-216ENST00000428445 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 HBS1LQ9Y450 684 aaKnown RBP17.24■□□□□ 0.35
VARS-216ENST00000428445 ITPR1Q14643 2758 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 PLXNA2O75051 1894 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 FAM149AA5PLN7 773 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 O00370 1275 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 SEMA4FO95754 770 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 NUMBP49757 651 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 DAOAP59103 153 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 E2F5Q15329 346 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 PKDCCQ504Y2 493 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 PMF1Q6P1K2 205 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 SIX6OS1Q8N1H7 587 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 UBR7Q8N806 425 aa17.23■□□□□ 0.35
VARS-216ENST00000428445 KAT5Q92993 513 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms