RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 LGMNQ99538 433 aa27.46■■□□□ 1.99
SH3GL3-202ENST00000427482 CRISPLD1Q9H336 500 aa27.46■■□□□ 1.99
SH3GL3-202ENST00000427482 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.46■■□□□ 1.99
SH3GL3-202ENST00000427482 ABHD14A-ACY1A0A1B0GW23 586 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 SHOX2O60902 331 aaPredicted RBP27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 HAPLN1P10915 354 aaPredicted RBP27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 HPDP32754 393 aaPredicted RBP27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 ATP1A2P50993 1020 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 SKIDA1Q1XH10 827 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 MSS51Q4VC12 460 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 TNFAIP8L3Q5GJ75 292 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 DENND5BQ6ZUT9 1274 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 PDZD4Q76G19 769 aaPredicted RBP27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 CCDC13Q8IYE1 715 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 ARFGAP2Q8N6H7 521 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 SPATA17Q96L03 361 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 GMIPQ9P107 970 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 SLC27A5Q9Y2P5 690 aa27.45■■□□□ 1.98
SH3GL3-202ENST00000427482 A0A087WUV0 522 aaPredicted RBP27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 PPP1R12AO14974 1030 aaPredicted RBP27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 MSI1O43347 362 aaKnown RBP27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 BANF1O75531 89 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 SOAT2O75908 522 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 LRIG2O94898 1065 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 RTN3O95197 1032 aaPredicted RBP27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 AGTP01019 485 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 GLUD2P49448 558 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 STAT4Q14765 748 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 USP41Q3LFD5 358 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 MGAT5BQ3V5L5 792 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 HP1BP3Q5SSJ5 553 aaPredicted RBP27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 PPP1R21Q6ZMI0 780 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 PDIK1LQ8N165 341 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 TOP1MTQ969P6 601 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 IGSF21Q96ID5 467 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 HAPLN3Q96S86 360 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 VN1R3Q9BXE9 311 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 MTRRQ9UBK8 725 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 YWHAQP27348 245 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 CCR1P32246 355 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 PPP2R5DQ14738 602 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 NETO2Q8NC67 525 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 GPR152Q8TDT2 470 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 SEPT5Q99719 369 aaPredicted RBP27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 CAPS2Q9BXY5 557 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 PRDM12Q9H4Q4 367 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 ETNK1Q9HBU6 452 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 TMEM51Q9NW97 253 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 NUDT5Q9UKK9 219 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 ZMYND8Q9ULU4 1186 aaPredicted RBP27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 CDY1Q9Y6F8 540 aa27.44■■□□□ 1.98
SH3GL3-202ENST00000427482 IVLP07476 585 aa27.43■■□□□ 1.98
SH3GL3-202ENST00000427482 CBLBQ13191 982 aa27.43■■□□□ 1.98
SH3GL3-202ENST00000427482 FAXCQ5TGI0 409 aa27.43■■□□□ 1.98
SH3GL3-202ENST00000427482 FBXO22Q8NEZ5 403 aa27.43■■□□□ 1.98
SH3GL3-202ENST00000427482 SERPINB11Q96P15 392 aa27.43■■□□□ 1.98
SH3GL3-202ENST00000427482 STMN4Q9H169 189 aaPredicted RBP27.43■■□□□ 1.98
SH3GL3-202ENST00000427482 NUP205Q92621 2012 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 A0A0A0MRY4 1105 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 TIMP1P01033 207 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 CAPN2P17655 700 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 PPP2R2AP63151 447 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 AP1B1Q10567 949 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 SLC8B1Q6J4K2 584 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 ANKMY2Q8IV38 441 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 VPS52Q8N1B4 723 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 FBXO32Q969P5 355 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 ZNF689Q96CS4 500 aaPredicted RBP27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 SPATA13Q96N96 652 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 CCDC77Q9BR77 488 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 WDR83Q9BRX9 315 aaKnown RBP27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 FRMD8Q9BZ67 464 aaPredicted RBP27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 COMMD8Q9NX08 183 aa27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 MYO18AQ92614 2054 aaKnown RBP27.42■■□□□ 1.98
SH3GL3-202ENST00000427482 ZNF189O75820 626 aaPredicted RBP27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 METTL18O95568 372 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 ITGB8P26012 769 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 EPHB2P29323 1055 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 DUSP4Q13115 394 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 PSMD5Q16401 504 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 ANKRD20A2Q5SQ80 823 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 ANKRD20A1Q5TYW2 823 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 ANKRD20A3Q5VUR7 823 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 ARHGEF18Q6ZSZ5 1173 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 TP53INP2Q8IXH6 220 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 NPWQ8N729 165 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 PYROXD1Q8WU10 500 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 P2RY11Q96G91 374 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 FERMT1Q9BQL6 677 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 RC3H2Q9HBD1 1191 aaKnown RBP27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 NEU3Q9UQ49 428 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 NR2E3Q9Y5X4 410 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 BACE2Q9Y5Z0 518 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 SHROOM3Q8TF72 1996 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 CLUHO75153 1309 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 ADAM12O43184 909 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 PAGE1O75459 146 aa27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 HSPA8P11142 646 aaKnown RBP27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 RPL10AP62906 217 aaKnown RBP27.41■■□□□ 1.98
SH3GL3-202ENST00000427482 IFI35P80217 286 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms