RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 PLD5Q8N7P1 536 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 BANPQ8N9N5 519 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 DENND1AQ8TEH3 1009 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 SIX4Q9UIU6 781 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 KCNG1Q9UIX4 513 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 PEX1O43933 1283 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 SLC25A11Q02978 314 aaKnown RBP13.79□□□□□ -0.2
USP42-203ENST00000426246 DUSP28Q4G0W2 176 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 HSP90AA5PQ58FG0 334 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 ATG16L1Q676U5 607 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 RGMBQ6NW40 437 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 DPP9Q86TI2 863 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 IFNL1Q8IU54 200 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 TRIM4Q9C037 500 aa13.79□□□□□ -0.2
USP42-203ENST00000426246 MANSC4A6NHS7 340 aaPredicted RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 TPP1O14773 563 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 GAS2O43903 313 aaKnown RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 PSMG1O95456 288 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 ARF4P18085 180 aaPredicted RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 CTGFP29279 349 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 VHLP40337 213 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 CXCR3P49682 368 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 NME5P56597 212 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 ITKQ08881 620 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 SLC45A4Q5BKX6 768 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 PRAMEF19Q5SWL8 479 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 ASRGL1Q7L266 308 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 ARHGAP24Q8N264 748 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 PCDH19Q8TAB3 1148 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 CNPY3Q9BT09 278 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 C20orf27Q9GZN8 174 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 ERAP1Q9NZ08 941 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 SLC39A10Q9ULF5 831 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 AP4E1Q9UPM8 1137 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 PSAT1Q9Y617 370 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 C2CD2LO14523 706 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 PHGDHO43175 533 aaKnown RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 TSPAN8P19075 237 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 CACNA2D1P54289 1103 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 MXD4Q14582 209 aaPredicted RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 PDCD2Q16342 344 aaPredicted RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 DEFB107AQ8IZN7 70 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 TMA16Q96EY4 203 aaKnown RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 RNF157Q96PX1 679 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 SNX25Q9H3E2 840 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 WDR55Q9H6Y2 383 aaPredicted RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 TUBGCP4Q9UGJ1 667 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 GOLGA8CPA6NN73 597 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 HBP1O60381 514 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 PGM3O95394 542 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 LMO2P25791 158 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 SULT1E1P49888 294 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 PLK1P53350 603 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 TLDC1Q6P9B6 456 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 ADGRD1Q6QNK2 874 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 COLGALT1Q8NBJ5 622 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 SLCO2A1Q92959 643 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 NKD2Q969F2 451 aaPredicted RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 OMDQ99983 421 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 ABHD16BQ9H3Z7 469 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 LRRC4Q9HBW1 653 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 CYP4F12Q9HCS2 524 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 XAB2Q9HCS7 855 aaKnown RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 KANSL3Q9P2N6 904 aa13.78□□□□□ -0.2
USP42-203ENST00000426246 MTO1Q9Y2Z2 717 aaKnown RBP13.78□□□□□ -0.2
USP42-203ENST00000426246 PROZP22891 400 aa13.77□□□□□ -0.2
USP42-203ENST00000426246 PSMB4P28070 264 aa13.77□□□□□ -0.2
USP42-203ENST00000426246 MARCH8Q5T0T0 291 aa13.77□□□□□ -0.2
USP42-203ENST00000426246 CCDC185Q8N715 623 aa13.77□□□□□ -0.2
USP42-203ENST00000426246 FAM156AQ8NDB6 213 aa13.77□□□□□ -0.2
USP42-203ENST00000426246 SLC2A14Q8TDB8 520 aa13.77□□□□□ -0.2
USP42-203ENST00000426246 OXCT2Q9BYC2 517 aaPredicted RBP13.77□□□□□ -0.2
USP42-203ENST00000426246 PAK5Q9P286 719 aa13.77□□□□□ -0.2
USP42-203ENST00000426246 CPSF3Q9UKF6 684 aaKnown RBP13.77□□□□□ -0.2
USP42-203ENST00000426246 GNEQ9Y223 722 aaKnown RBP13.77□□□□□ -0.2
USP42-203ENST00000426246 PIN4Q9Y237 131 aaKnown RBP13.77□□□□□ -0.2
USP42-203ENST00000426246 CTSHP09668 335 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 NDUFV1P49821 464 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 RIPK1Q13546 671 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 FAM47CQ5HY64 1035 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 TRNP1Q6NT89 227 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 ZBTB46Q86UZ6 589 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 STKLD1Q8NE28 680 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 OR52K1Q8NGK4 314 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 ZSCAN18Q8TBC5 510 aaPredicted RBP13.77□□□□□ -0.21
USP42-203ENST00000426246 CDKL2Q92772 493 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 ZIC5Q96T25 663 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 WWP1Q9H0M0 922 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 GJD2Q9UKL4 321 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 DRG1Q9Y295 367 aaKnown RBP13.77□□□□□ -0.21
USP42-203ENST00000426246 C2CD2Q9Y426 696 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 TLL2Q9Y6L7 1015 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 MYOCOSA0A1B0GUC4 107 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 M0QYT0 321 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 ACKR2O00590 384 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 PRPF4O43172 522 aaKnown RBP eCLIP13.77□□□□□ -0.21
USP42-203ENST00000426246 AMHP03971 560 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 MMP3P08254 477 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 HIC1Q14526 733 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms