RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 USP46P62068 366 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 DEFB103AP81534 67 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 NRG1Q02297 640 aaPredicted RBP14.89□□□□□ -0.03
CDK3-201ENST00000425876 DSG1Q02413 1049 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 DUSP4Q13115 394 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 EMC10Q5UCC4 262 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 SDHAF4Q5VUM1 108 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 KIAA1841Q6NSI8 718 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 CENPUQ71F23 418 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 GPR65Q8IYL9 337 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 ZBTB9Q96C00 473 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 FERMT1Q9BQL6 677 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 TTLL2Q9BWV7 592 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 CRISPLD1Q9H336 500 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 IL23AQ9NPF7 189 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 TLR8Q9NR97 1041 aaKnown RBP14.89□□□□□ -0.03
CDK3-201ENST00000425876 NINJ2Q9NZG7 142 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 AFF4Q9UHB7 1163 aaKnown RBP14.89□□□□□ -0.03
CDK3-201ENST00000425876 ADAM21Q9UKJ8 722 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 TLR6Q9Y2C9 796 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 SLC27A5Q9Y2P5 690 aa14.89□□□□□ -0.03
CDK3-201ENST00000425876 WDR27A2RRH5 827 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 KCNU1A8MYU2 1149 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 TCEA3O75764 348 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 ZDHHC11BP0C7U3 371 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 HOXC13P31276 330 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 ARL4CP56559 192 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 BTG3Q14201 252 aaPredicted RBP14.88□□□□□ -0.03
CDK3-201ENST00000425876 KCNJ11Q14654 390 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 PRKD1Q15139 912 aaPredicted RBP14.88□□□□□ -0.03
CDK3-201ENST00000425876 HIF1AQ16665 826 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 KRT71Q3SY84 523 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 SPOUT1Q5T280 376 aaKnown RBP14.88□□□□□ -0.03
CDK3-201ENST00000425876 PRPF38BQ5VTL8 546 aaKnown RBP14.88□□□□□ -0.03
CDK3-201ENST00000425876 TPGS2Q68CL5 300 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 HEATR6Q6AI08 1181 aaKnown RBP14.88□□□□□ -0.03
CDK3-201ENST00000425876 PPP1R21Q6ZMI0 780 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 ZNF276Q8N554 614 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 FAM76AQ8TAV0 307 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 FBXO32Q969P5 355 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 EXOC4Q96A65 974 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 SLC39A13Q96H72 371 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 TMEM169Q96HH4 297 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 PWWP2AQ96N64 755 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 SEPT5Q99719 369 aaPredicted RBP14.88□□□□□ -0.03
CDK3-201ENST00000425876 KLC2Q9H0B6 622 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 OSER1Q9NX31 292 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 SPG21Q9NZD8 308 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 GMIPQ9P107 970 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 STK39Q9UEW8 545 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 MFHAS1Q9Y4C4 1052 aa14.88□□□□□ -0.03
CDK3-201ENST00000425876 E7ESA3 106 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 LRIG2O94898 1065 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 ABLIM3O94929 683 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 SHBGP04278 402 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 MX2P20592 715 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 OR1D2P34982 312 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 SERPINB6P35237 376 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 KYNUQ16719 465 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 C6orf118Q5T5N4 469 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 COLGALT1Q8NBJ5 622 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 HTR3CQ8WXA8 447 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 PGM2Q96G03 612 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 CLSTN3Q9BQT9 956 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 SAYSD1Q9NPB0 183 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.87□□□□□ -0.03
CDK3-201ENST00000425876 PSD3Q9NYI0 1048 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 SFMBT1Q9UHJ3 866 aa14.87□□□□□ -0.03
CDK3-201ENST00000425876 SLC38A8A6NNN8 435 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 ADAM12O43184 909 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 STK10O94804 968 aaKnown RBP14.86□□□□□ -0.03
CDK3-201ENST00000425876 MAP3K6O95382 1288 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 EPHB2P29323 1055 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 PPM1AP35813 382 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 BASP1P80723 227 aaKnown RBP14.86□□□□□ -0.03
CDK3-201ENST00000425876 TAF10Q12962 218 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 MTA1Q13330 715 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 TERF2Q15554 542 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 ACBD5Q5T8D3 534 aaPredicted RBP14.86□□□□□ -0.03
CDK3-201ENST00000425876 MANEALQ5VSG8 457 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 ANKRD22Q5VYY1 191 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 B4GALNT4Q76KP1 1039 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 DDX53Q86TM3 631 aaKnown RBP14.86□□□□□ -0.03
CDK3-201ENST00000425876 ZNF461Q8TAF7 563 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 OVCA2Q8WZ82 227 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 C1orf74Q96LT6 269 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 UBE2OQ9C0C9 1292 aaKnown RBP14.86□□□□□ -0.03
CDK3-201ENST00000425876 PRDM12Q9H4Q4 367 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 RAB6BQ9NRW1 208 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 DNAJC17Q9NVM6 304 aaKnown RBP14.86□□□□□ -0.03
CDK3-201ENST00000425876 MRPL42Q9Y6G3 142 aaKnown RBP14.86□□□□□ -0.03
CDK3-201ENST00000425876 MYO16Q9Y6X6 1858 aa14.86□□□□□ -0.03
CDK3-201ENST00000425876 A0A0A0MRY4 1105 aa14.85□□□□□ -0.03
CDK3-201ENST00000425876 FGF10O15520 208 aaPredicted RBP14.85□□□□□ -0.03
CDK3-201ENST00000425876 OPHN1O60890 802 aa14.85□□□□□ -0.03
CDK3-201ENST00000425876 PAGE1O75459 146 aa14.85□□□□□ -0.03
CDK3-201ENST00000425876 SOAT2O75908 522 aa14.85□□□□□ -0.03
CDK3-201ENST00000425876 TMEM63AO94886 807 aa14.85□□□□□ -0.03
CDK3-201ENST00000425876 ACSL3O95573 720 aa14.85□□□□□ -0.03
CDK3-201ENST00000425876 TSHRP16473 764 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms