RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 TMPRSS4Q9NRS4 437 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 PLK2Q9NYY3 685 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 CTTNBP2NLQ9P2B4 639 aa25.37■■□□□ 1.65
VEGFA-209ENST00000425836 PENKP01210 267 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-209ENST00000425836 TYRP14679 529 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 OPRD1P41143 372 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 RAP1GAP2Q684P5 730 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 C1orf228Q6PIY5 440 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 C12orf40Q86WS4 652 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 TMA16Q96EY4 203 aaKnown RBP25.36■■□□□ 1.65
VEGFA-209ENST00000425836 MYEOVQ96EZ4 313 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 PRMT1Q99873 361 aaKnown RBP25.36■■□□□ 1.65
VEGFA-209ENST00000425836 UVRAGQ9P2Y5 699 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 PCDHA13Q9Y5I0 950 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 HS3ST4Q9Y661 456 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 TRIOO75962 3097 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 COL4A3Q01955 1670 aa25.36■■□□□ 1.65
VEGFA-209ENST00000425836 KANSL1LA0AUZ9 987 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 TACR2P21452 398 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 SLC6A11P48066 632 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 MPPE1Q53F39 396 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 CHSY1Q86X52 802 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 ETFBKMTQ8IXQ9 262 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 ARFGAP1Q8N6T3 406 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 NAT16Q8N8M0 369 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 ZNF564Q8TBZ8 553 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-209ENST00000425836 DDI1Q8WTU0 396 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 BTBD6Q96KE9 485 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 MFSD1Q9H3U5 465 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 ANAPC7Q9UJX3 599 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 CYBBP04839 570 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 DESP17661 470 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 ADRA1BP35368 520 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 GALK1P51570 392 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 SGSHP51688 502 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 PON2Q15165 354 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 PRICKLE1Q96MT3 831 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-209ENST00000425836 HAPLN3Q96S86 360 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 P2RY13Q9BPV8 354 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 IRX2Q9BZI1 471 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-209ENST00000425836 FOXQ1Q9C009 403 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 FBRSL1Q9HCM7 1045 aaKnown RBP25.35■■□□□ 1.65
VEGFA-209ENST00000425836 LTB4R2Q9NPC1 389 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 C11orf16Q9NQ32 467 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 REXO2Q9Y3B8 237 aaKnown RBP25.35■■□□□ 1.65
VEGFA-209ENST00000425836 TICRRQ7Z2Z1 1910 aa25.35■■□□□ 1.65
VEGFA-209ENST00000425836 STK25O00506 426 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 AUHQ13825 339 aaKnown RBP25.34■■□□□ 1.65
VEGFA-209ENST00000425836 SCYL2Q6P3W7 929 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 LGI2Q8N0V4 545 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 CCDC185Q8N715 623 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 FLCNQ8NFG4 579 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 SLC35G2Q8TBE7 412 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 CD101Q93033 1021 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 PBXIP1Q96AQ6 731 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 SIK2Q9H0K1 926 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 OSGEPQ9NPF4 335 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 MRPS17Q9Y2R5 130 aaKnown RBP25.34■■□□□ 1.65
VEGFA-209ENST00000425836 MTF2Q9Y483 593 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-209ENST00000425836 SNX10Q9Y5X0 201 aa25.34■■□□□ 1.65
VEGFA-209ENST00000425836 TECTAO75443 2155 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 FAM86C2PA6NEL3 165 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 MYO1FO00160 1098 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 CACNG3O60359 315 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 TARSP26639 723 aaKnown RBP25.33■■□□□ 1.65
VEGFA-209ENST00000425836 GGCXP38435 758 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 BMP8AQ7Z5Y6 402 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 LRRC8AQ8IWT6 810 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 ZNF687Q8N1G0 1237 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 ANP32BQ92688 251 aaKnown RBP25.33■■□□□ 1.65
VEGFA-209ENST00000425836 C1orf74Q96LT6 269 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 IP6K2Q9UHH9 426 aa25.33■■□□□ 1.65
VEGFA-209ENST00000425836 NDRG2Q9UN36 371 aaKnown RBP25.33■■□□□ 1.65
VEGFA-209ENST00000425836 F5H5T6 163 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 TULP3O75386 442 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 RNF8O76064 485 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 IPO7O95373 1038 aaKnown RBP25.32■■□□□ 1.64
VEGFA-209ENST00000425836 HOXD9P28356 352 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-209ENST00000425836 EIF2DP41214 584 aaKnown RBP25.32■■□□□ 1.64
VEGFA-209ENST00000425836 RPS24P62847 133 aaKnown RBP25.32■■□□□ 1.64
VEGFA-209ENST00000425836 PIGHQ14442 188 aaPredicted RBP25.32■■□□□ 1.64
VEGFA-209ENST00000425836 UBXN2BQ14CS0 331 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 ACAP1Q15027 740 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 ARL13BQ3SXY8 428 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 TMEM196Q5HYL7 178 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 MPP7Q5T2T1 576 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 CWF19L1Q69YN2 538 aaKnown RBP25.32■■□□□ 1.64
VEGFA-209ENST00000425836 FBXL22Q6P050 247 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 C14orf80Q86SX3 495 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 NTAN1Q96AB6 310 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 XPO6Q96QU8 1125 aaKnown RBP25.32■■□□□ 1.64
VEGFA-209ENST00000425836 NELL2Q99435 816 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 LUC7LQ9NQ29 371 aaKnown RBP25.32■■□□□ 1.64
VEGFA-209ENST00000425836 FBXO10Q9UK96 956 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 CLEC4EQ9ULY5 219 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 TFR2Q9UP52 801 aa25.32■■□□□ 1.64
VEGFA-209ENST00000425836 FAM170BA6NMN3 283 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 TBL1XO60907 577 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 LRCH4O75427 683 aa25.31■■□□□ 1.64
VEGFA-209ENST00000425836 MESP2Q0VG99 397 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms