RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 NEPROQ6NW34 567 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 BTLAQ7Z6A9 289 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 RFX6Q8HWS3 928 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SPNS2Q8IVW8 549 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SP8Q8IXZ3 490 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SCAIQ8N9R8 606 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 FAM47BQ8NA70 645 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SPATA18Q8TC71 538 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 LRTOMTQ8WZ04 291 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ISOC1Q96CN7 298 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 MXRA8Q9BRK3 442 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 TCHPQ9BT92 498 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ZNF696Q9H7X3 374 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 THAP1Q9NVV9 213 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SFMBT1Q9UHJ3 866 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 RIMS3Q9UJD0 308 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 PCDHB2Q9Y5E7 798 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SNX13Q9Y5W8 968 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 KCNH1O95259 989 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 ITGAVP06756 1048 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 YAP1P46937 504 aaKnown RBP11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 CDK9P50750 372 aaKnown RBP11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 NOMO3P69849 1222 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 MTX3Q5HYI7 312 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 ZNF786Q8N393 782 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 Q8N9G6 341 aaPredicted RBP11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 JADE3Q92613 823 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 PLEKHA8Q96JA3 519 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 SIAEQ9HAT2 523 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 TBC1D23Q9NUY8 699 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 PPME1Q9Y570 386 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 SNNO75324 88 aaPredicted RBP11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 IL1BP01584 269 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 ZNF182P17025 639 aaPredicted RBP11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 PRELPP51888 382 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 RPS6P62753 249 aaKnown RBP11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 MRPS9P82933 396 aaKnown RBP11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 CEACAM7Q14002 265 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 NFIL3Q16649 462 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 ANO4Q32M45 955 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 PERM1Q5SV97 790 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 METTL21CQ5VZV1 264 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 DARS2Q6PI48 645 aaKnown RBP11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC9A9Q8IVB4 645 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 KIAA0319LQ8IZA0 1049 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC35B2Q8TB61 432 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 CLIP3Q96DZ5 547 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 NUF2Q9BZD4 464 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 NDEL1Q9GZM8 345 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 COG4Q9H9E3 785 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 PCDH12Q9NPG4 1184 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC9A2Q9UBY0 812 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 RAB26Q9ULW5 256 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
SEC61A1-202ENST00000424880 C1orf232A0A0U1RR37 186 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 NRP1O14786 923 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TCF7P36402 384 aaPredicted RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 PRR23BQ6ZRT6 265 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TMEM26Q6ZUK4 368 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 LZTR1Q8N653 840 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 ZNF781Q8N8C0 355 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 DDHD1Q8NEL9 900 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 KBTBD7Q8WVZ9 684 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 CASP10Q92851 521 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 PPWD1Q96BP3 646 aaKnown RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 RCN3Q96D15 328 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 CMTM5Q96DZ9 223 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TRPV6Q9H1D0 765 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 PLAC1Q9HBJ0 212 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TMEM8AQ9HCN3 771 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 MRPL47Q9HD33 250 aaKnown RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TEX264Q9Y6I9 313 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 A0A1W2PQ67 120 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 KLF11O14901 512 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 GTF2A2P52657 109 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 NKX2-5P52952 324 aaPredicted RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 SP4Q02446 784 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 WASHC5Q12768 1159 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 CCDC153Q494R4 210 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 CASC4Q6P4E1 433 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 CES3Q6UWW8 571 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TMEM130Q8N3G9 435 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 CERS5Q8N5B7 392 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 PCDH20Q8N6Y1 951 aaKnown RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 DDI1Q8WTU0 396 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 EPS8L2Q9H6S3 715 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 NOL11Q9H8H0 719 aaKnown RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 AVENQ9NQS1 362 aaPredicted RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 C20orf96Q9NUD7 363 aaPredicted RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 GMPR2Q9P2T1 348 aaKnown RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 PADI4Q9UM07 663 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TTLL3Q9Y4R7 772 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 ST14Q9Y5Y6 855 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 MYO18AQ92614 2054 aaKnown RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TBX3O15119 743 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 TPST1O60507 370 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 KLHL2O95198 593 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 GSRP00390 522 aa11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 FGF3P11487 239 aaPredicted RBP11.6□□□□□ -0.55
SEC61A1-202ENST00000424880 CDH3P22223 829 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms