RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 TMEM63AO94886 807 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 FESP07332 822 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 TSHRP16473 764 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 BDNFP23560 247 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 CACNA2D1P54289 1103 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 GPX6P59796 221 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 PM20D1Q6GTS8 502 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 HFE2Q6ZVN8 426 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 GPRIN1Q7Z2K8 1008 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 ATP11CQ8NB49 1132 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 RNF139Q8WU17 664 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 ELAC1Q9H777 363 aaKnown RBP17.09■□□□□ 0.33
CMTM3-202ENST00000424011 USP3Q9Y6I4 520 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 SF3B1O75533 1304 aaKnown RBP eCLIP17.09■□□□□ 0.33
CMTM3-202ENST00000424011 SYNJ2BP-COX16A0A087WUM0 186 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 FYNP06241 537 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 VIMP08670 466 aaKnown RBP17.08■□□□□ 0.33
CMTM3-202ENST00000424011 ATP2A2P16615 1042 aaKnown RBP17.08■□□□□ 0.33
CMTM3-202ENST00000424011 GOT1P17174 413 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 ZNF135P52742 658 aaPredicted RBP17.08■□□□□ 0.33
CMTM3-202ENST00000424011 SCAPQ12770 1279 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.33
CMTM3-202ENST00000424011 NR1H3Q13133 447 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 NCBP2-AS2Q69YL0 99 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 SPATA2LQ8IUW3 424 aaPredicted RBP17.08■□□□□ 0.33
CMTM3-202ENST00000424011 OR10T2Q8NGX3 314 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 DYDC1Q8WWB3 177 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 WDR83Q9BRX9 315 aaKnown RBP17.08■□□□□ 0.33
CMTM3-202ENST00000424011 PIGVQ9NUD9 493 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 COX16Q9P0S2 106 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 CLUHO75153 1309 aa17.08■□□□□ 0.33
CMTM3-202ENST00000424011 TTC36A6NLP5 189 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 ADRA1BP35368 520 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 GBE1Q04446 702 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 MTM1Q13496 603 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 CLLU1OSQ5K130 101 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 THEMIS2Q5TEJ8 643 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 BEND5Q7L4P6 421 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 PIGWQ7Z7B1 504 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 FAM126BQ8IXS8 530 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 COLGALT2Q8IYK4 626 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 LINC01599Q8WXQ3 324 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 QKIQ96PU8 341 aaKnown RBP eCLIP17.08■□□□□ 0.32
CMTM3-202ENST00000424011 RAB6BQ9NRW1 208 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 TMEM30AQ9NV96 361 aa17.08■□□□□ 0.32
CMTM3-202ENST00000424011 RASA4BC9J798 803 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 RASA4O43374 803 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 GCATO75600 419 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 ITGB1P05556 798 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 AMPD1P23109 780 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 PITX1P78337 314 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-202ENST00000424011 CBLBQ13191 982 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 KCNJ11Q14654 390 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 HEATR6Q6AI08 1181 aaKnown RBP17.07■□□□□ 0.32
CMTM3-202ENST00000424011 PDZD4Q76G19 769 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-202ENST00000424011 TDRPQ86YL5 185 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 ABI1Q8IZP0 508 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 PYROXD2Q8N2H3 581 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 GDAP1Q8TB36 358 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 TFB1MQ8WVM0 346 aaKnown RBP17.07■□□□□ 0.32
CMTM3-202ENST00000424011 ZNF570Q96NI8 536 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 ARHGEF4Q9NR80 690 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 DTLQ9NZJ0 730 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 FETUBQ9UGM5 382 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 FBXW11Q9UKB1 542 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 ACTL7BQ9Y614 415 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 DDHD2O94830 711 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 SSTR1P30872 391 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 KCNT2Q6UVM3 1135 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 TRABD2AQ86V40 505 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 ZNF280BQ86YH2 543 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 DCP1BQ8IZD4 617 aaKnown RBP17.07■□□□□ 0.32
CMTM3-202ENST00000424011 DRAXINQ8NBI3 349 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-202ENST00000424011 MRRFQ96E11 262 aaKnown RBP17.07■□□□□ 0.32
CMTM3-202ENST00000424011 TBC1D13Q9NVG8 400 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 TMLHEQ9NVH6 421 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 DDIT4Q9NX09 232 aa17.07■□□□□ 0.32
CMTM3-202ENST00000424011 NOP53Q9NZM5 478 aaKnown RBP17.07■□□□□ 0.32
CMTM3-202ENST00000424011 ZMYND8Q9ULU4 1186 aaPredicted RBP17.07■□□□□ 0.32
CMTM3-202ENST00000424011 EEF2KO00418 725 aaKnown RBP17.06■□□□□ 0.32
CMTM3-202ENST00000424011 STK10O94804 968 aaKnown RBP17.06■□□□□ 0.32
CMTM3-202ENST00000424011 OAZ2O95190 189 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 MAP3K6O95382 1288 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 MAGEA6P43360 314 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 OR1G1P47890 313 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 HCAR3P49019 387 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 RASA2Q15283 850 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 PKN2Q16513 984 aaKnown RBP17.06■□□□□ 0.32
CMTM3-202ENST00000424011 LRRTM3Q86VH5 581 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 PALM2Q8IXS6 379 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 VPS52Q8N1B4 723 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 CCDC197Q8NCU1 140 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 OLFM3Q96PB7 478 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 ELAC2Q9BQ52 826 aaKnown RBP17.06■□□□□ 0.32
CMTM3-202ENST00000424011 RHOBTB2Q9BYZ6 727 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 MAGEB5Q9BZ81 275 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 SLC24A2Q9UI40 661 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 PCDHB7Q9Y5E2 793 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 RAD54BQ9Y620 910 aa17.06■□□□□ 0.32
CMTM3-202ENST00000424011 TDRD15B5MCY1 1934 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms