RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 EMC10Q5UCC4 262 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 RAP1GAP2Q684P5 730 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 PRR23BQ6ZRT6 265 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 SLC26A9Q7LBE3 791 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 ALYREFQ86V81 257 aaKnown RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 ETFBKMTQ8IXQ9 262 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 MAML2Q8IZL2 1156 aaPredicted RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 LGI2Q8N0V4 545 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 CPXM2Q8N436 756 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 ZNF513Q8N8E2 541 aaPredicted RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 TXNDC5Q8NBS9 432 aaKnown RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 HJURPQ8NCD3 748 aaPredicted RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 TSTD1Q8NFU3 115 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 USP33Q8TEY7 942 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 EZH1Q92800 747 aaPredicted RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 FCRL2Q96LA5 508 aaPredicted RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 ZNF830Q96NB3 372 aaPredicted RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 SLC2A13Q96QE2 648 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 CIPCQ9C0C6 399 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 PRMT8Q9NR22 394 aaPredicted RBP10.04□□□□□ -0.8
HERC3-204ENST00000422770 ASNSD1Q9NWL6 643 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 ADAM22Q9P0K1 906 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 MARK1Q9P0L2 795 aa10.04□□□□□ -0.8
HERC3-204ENST00000422770 BCCIPQ9P287 314 aaKnown RBP eCLIP10.04□□□□□ -0.8
HERC3-204ENST00000422770 ANKRD62A6NC57 917 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 F5H5T6 163 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 GJB6O95452 261 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 LATS1O95835 1130 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 IGLV3-27P01718 113 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 CYP1A1P04798 512 aaPredicted RBP10.03□□□□□ -0.8
HERC3-204ENST00000422770 SERPING1P05155 500 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 PLEKP08567 350 aaPredicted RBP10.03□□□□□ -0.8
HERC3-204ENST00000422770 SLC2A3P11169 496 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 HOXC13P31276 330 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 SLC6A4P31645 630 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 CCR1P32246 355 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 NOS2P35228 1153 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 EIF4A3P38919 411 aaKnown RBP10.03□□□□□ -0.8
HERC3-204ENST00000422770 MATKP42679 507 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 TNFRSF4P43489 277 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 GABRB2P47870 512 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 SGSHP51688 502 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 MRPS21P82921 87 aaKnown RBP10.03□□□□□ -0.8
HERC3-204ENST00000422770 ATP11AP98196 1134 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 DEUP1Q05D60 604 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 NNTQ13423 1086 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 CDH18Q13634 790 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 FYB2Q5VWT5 728 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 SDE2Q6IQ49 451 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 CEP68Q76N32 757 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 ANKS1BQ7Z6G8 1248 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 TMEM139Q8IV31 216 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 MFN1Q8IWA4 741 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 LRRC8AQ8IWT6 810 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 CHPFQ8IZ52 775 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 CFAP52Q8N1V2 620 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 PGBD3Q8N328 593 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 CARNMT1Q8N4J0 409 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 EMC1Q8N766 993 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 UCMAQ8WVF2 138 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 NKD2Q969F2 451 aaPredicted RBP10.03□□□□□ -0.8
HERC3-204ENST00000422770 BTN2A3PQ96KV6 586 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 CFAP57Q96MR6 1250 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 PCDHB18PQ96TA0 734 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 TBCBQ99426 244 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 DESI2Q9BSY9 194 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.03□□□□□ -0.8
HERC3-204ENST00000422770 SELENOOQ9BVL4 669 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 SIK2Q9H0K1 926 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 ZSCAN32Q9NX65 697 aa10.03□□□□□ -0.8
HERC3-204ENST00000422770 NYNRINQ9P2P1 1898 aaKnown RBP10.03□□□□□ -0.8
HERC3-204ENST00000422770 XPO7Q9UIA9 1087 aaKnown RBP10.03□□□□□ -0.8
HERC3-204ENST00000422770 RALGAPA1Q6GYQ0 2036 aa10.02□□□□□ -0.8
HERC3-204ENST00000422770 ZBTB24O43167 697 aaPredicted RBP10.02□□□□□ -0.81
HERC3-204ENST00000422770 PENKP01210 267 aaPredicted RBP10.02□□□□□ -0.81
HERC3-204ENST00000422770 CALB1P05937 261 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 TFE3P19532 575 aaPredicted RBP10.02□□□□□ -0.81
HERC3-204ENST00000422770 TACR2P21452 398 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 FECHP22830 423 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 HOXD9P28356 352 aaPredicted RBP10.02□□□□□ -0.81
HERC3-204ENST00000422770 CYLC1P35663 651 aaPredicted RBP10.02□□□□□ -0.81
HERC3-204ENST00000422770 FLT3P36888 993 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 GGCXP38435 758 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 NUMBP49757 651 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 DGKEP52429 567 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 RPS24P62847 133 aaKnown RBP10.02□□□□□ -0.81
HERC3-204ENST00000422770 CENPCQ03188 943 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 DMWDQ09019 674 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 LPAL2Q16609 132 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 ZNF528Q3MIS6 628 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 FAM133BQ5BKY9 247 aaKnown RBP10.02□□□□□ -0.81
HERC3-204ENST00000422770 EOGTQ5NDL2 527 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 EGFLAMQ63HQ2 1017 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 HGSNATQ68CP4 663 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 NADSYN1Q6IA69 706 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 ANO7Q6IWH7 933 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 DNAJC24Q6P3W2 148 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 WDR59Q6PJI9 974 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 BEND5Q7L4P6 421 aa10.02□□□□□ -0.81
HERC3-204ENST00000422770 TRMT11Q7Z4G4 463 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms