RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 FAM71DQ8N9W8 422 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 C16orf52Q8NHV5 167 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 PARD3BQ8TEW8 1205 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 PNISRQ8TF01 805 aaKnown RBP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 GJA10Q969M2 543 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 WDYHV1Q96HA8 205 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 MARK4Q96L34 752 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 EIF3CQ99613 913 aaKnown RBP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 ZNF700Q9H0M5 742 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 PCDHAC1Q9H158 963 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 FOXP1Q9H334 677 aaPredicted RBP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 USP29Q9HBJ7 922 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 NLRC4Q9NPP4 1024 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 SMC4Q9NTJ3 1288 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 CA14Q9ULX7 337 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 SCAF8Q9UPN6 1271 aaKnown RBP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 MAN2B2Q9Y2E5 1009 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 SQORQ9Y6N5 450 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 POLR1AO95602 1720 aaPredicted RBP3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 CTTNBP2Q8WZ74 1663 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 TIAM1Q13009 1591 aa3.8□□□□□ -1.8
SDCBPP3-201ENST00000419629 HFM1A2PYH4 1435 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 YEATS2Q9ULM3 1422 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 DHX29Q7Z478 1369 aaKnown RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 NPC1L1Q9UHC9 1359 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 AGPSO00116 658 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 ZSCAN9O15535 394 aaPredicted RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 VIPP01282 170 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 SLC3A2P08195 630 aaKnown RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 CCDC172P0C7W6 258 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 CYP2A6P11509 494 aaPredicted RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 EGR1P18146 543 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 MMP8P22894 467 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 EEF1GP26641 437 aaKnown RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 MST1P26927 711 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 CFHR3Q02985 330 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 CCDC15Q0P6D6 951 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 ATP1A4Q13733 1029 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 KCNB1Q14721 858 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 LARS2Q15031 903 aaKnown RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 RBMS2Q15434 407 aaKnown RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 MAPKAPK3Q16644 382 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 SLC35G1Q2M3R5 365 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 MAP9Q49MG5 647 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 DGKKQ5KSL6 1271 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 ABLIM2Q6H8Q1 611 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 CLEC17AQ6ZS10 378 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 KRT222Q8N1A0 295 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 METTL25Q8N6Q8 603 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 SVIPQ8NHG7 77 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 MAFAQ8NHW3 353 aaPredicted RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 SUN3Q8TAQ9 357 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 PIBF1Q8WXW3 757 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 ANKRD7Q92527 254 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 CTHRC1Q96CG8 243 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 HIC2Q96JB3 615 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 NUDT22Q9BRQ3 303 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 NECTIN3Q9NQS3 549 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 SLC52A1Q9NWF4 448 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 GAR1Q9NY12 217 aaKnown RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 RGL1Q9NZL6 768 aa3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 CWC15Q9P013 229 aaKnown RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 ZMYND8Q9ULU4 1186 aaPredicted RBP3.79□□□□□ -1.8
SDCBPP3-201ENST00000419629 FMN1Q68DA7 1419 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 ANKRD30AQ9BXX3 1397 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 WIZO95785 1651 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 SCRIBQ14160 1630 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 CGNL1Q0VF96 1302 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 KIF7Q2M1P5 1343 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 KIF16BQ96L93 1317 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 TTC36A6NLP5 189 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 TTC34A8MYJ7 566 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 ADAM10O14672 748 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 NCK2O43639 380 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 SRGAP2BP0DMP2 458 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 TMIGD3P0DMS9 266 aaPredicted RBP3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 APEHP13798 732 aaKnown RBP3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 PRF1P14222 555 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 GABRB3P28472 473 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 HTR7P34969 479 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 TECP42680 631 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 GSTM5P46439 218 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 SEMA3AQ14563 771 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 ACOX1Q15067 660 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 CCDC91Q7Z6B0 441 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 RPAINQ86UA6 219 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 RASGRP3Q8IV61 690 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 SMC5Q8IY18 1101 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 SYTL1Q8IYJ3 562 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 NGEFQ8N5V2 710 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 LINC01465Q8N7H1 131 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 OVCA2Q8WZ82 227 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 SNX21Q969T3 373 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 PSMD1Q99460 953 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 EFHD1Q9BUP0 239 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 PANK3Q9H999 370 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 HELLSQ9NRZ9 838 aa3.78□□□□□ -1.8
SDCBPP3-201ENST00000419629 POT1Q9NUX5 634 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms