RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 CNGA4Q8IV77 575 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 TC2NQ8N9U0 490 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 RXFP2Q8WXD0 754 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 EXOC4Q96A65 974 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 MYEOVQ96EZ4 313 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 PNKPQ96T60 521 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 ANLNQ9NQW6 1124 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 SLC27A6Q9Y2P4 619 aa19.35■□□□□ 0.69
PTCD3-204ENST00000418628 TMCO5BA8MYB1 307 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 K7EQS6 105 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 KAT7O95251 611 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 F9P00740 461 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 FTLP02792 175 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-204ENST00000418628 MAMLD1Q13495 774 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 FBXO43Q4G163 708 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 MPPE1Q53F39 396 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 MS4A13Q5J8X5 152 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 DNAJC24Q6P3W2 148 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 VPS36Q86VN1 386 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 SFTPA1Q8IWL2 248 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 MAML2Q8IZL2 1156 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-204ENST00000418628 TERB1Q8NA31 727 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 PRSS33Q8NF86 280 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 SELENOOQ9BVL4 669 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 PRMT8Q9NR22 394 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-204ENST00000418628 CLEC4EQ9ULY5 219 aa19.34■□□□□ 0.69
PTCD3-204ENST00000418628 GOLGA6L7A0A1B0GV03 622 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 CHURC1-FNTBB4DL54 471 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 TRIM24O15164 1050 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 ATMINO43313 823 aaPredicted RBP19.33■□□□□ 0.68
PTCD3-204ENST00000418628 PAPSS2O95340 614 aaPredicted RBP19.33■□□□□ 0.68
PTCD3-204ENST00000418628 MOCS2O96007 188 aaPredicted RBP19.33■□□□□ 0.68
PTCD3-204ENST00000418628 TPM1P09493 284 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 MYBL1P10243 752 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 PDGFRAP16234 1089 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 SDC4P31431 198 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 RDXP35241 583 aaKnown RBP19.33■□□□□ 0.68
PTCD3-204ENST00000418628 GRIA2P42262 883 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 ATXN1P54253 815 aaKnown RBP19.33■□□□□ 0.68
PTCD3-204ENST00000418628 ADKP55263 362 aaKnown RBP19.33■□□□□ 0.68
PTCD3-204ENST00000418628 RPL7AP62424 266 aaKnown RBP19.33■□□□□ 0.68
PTCD3-204ENST00000418628 KDSRQ06136 332 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 NME3Q13232 169 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 C5orf22Q49AR2 442 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 RAB6CQ53S08 254 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 PKN3Q6P5Z2 889 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 RFWD3Q6PCD5 774 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 STRADAQ7RTN6 431 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 NAT16Q8N8M0 369 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 ATP6V0D2Q8N8Y2 350 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 MCEEQ96PE7 176 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 XPO6Q96QU8 1125 aaKnown RBP19.33■□□□□ 0.68
PTCD3-204ENST00000418628 RAB6CQ9H0N0 254 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 ARHGEF4Q9NR80 690 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 DNAJC17Q9NVM6 304 aaKnown RBP19.33■□□□□ 0.68
PTCD3-204ENST00000418628 PLK2Q9NYY3 685 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 DEC1Q9P2X7 70 aa19.33■□□□□ 0.68
PTCD3-204ENST00000418628 SYNJ2BP-COX16A0A087WUM0 186 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 ANTXRLA6NF34 631 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 AKR1B15C9JRZ8 316 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-204ENST00000418628 RNF40O75150 1001 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 ADCY5O95622 1261 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 CYBBP04839 570 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 APODP05090 189 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 TDGF1P13385 188 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 GPD1P21695 349 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 FECHP22830 423 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 EIF4A3P38919 411 aaKnown RBP19.32■□□□□ 0.68
PTCD3-204ENST00000418628 KIR2DL1P43626 348 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-204ENST00000418628 ZNF143P52747 638 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-204ENST00000418628 HDAC4P56524 1084 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 OGDHQ02218 1023 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 DEUP1Q05D60 604 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 ZNF252P-AS1Q0IIN9 211 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 TCF15Q12870 199 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 MTAPQ13126 283 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 SLC18A3Q16572 532 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 C15orf59Q2T9L4 293 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-204ENST00000418628 GRAMD4Q6IC98 578 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 KIAA0907Q7Z7F0 614 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-204ENST00000418628 ZNF683Q8IZ20 524 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 SPEM1Q8N4L4 309 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTCD3-204ENST00000418628 HJURPQ8NCD3 748 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-204ENST00000418628 FNIP1Q8TF40 1166 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 TRIM11Q96F44 468 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 LMLNQ96KR4 655 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 PRRX2Q99811 253 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 DDX50Q9BQ39 737 aaKnown RBP19.32■□□□□ 0.68
PTCD3-204ENST00000418628 SLC2A11Q9BYW1 496 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 PARVAQ9NVD7 372 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 COX16Q9P0S2 106 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 HCN2Q9UL51 889 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 STARD13Q9Y3M8 1113 aa19.32■□□□□ 0.68
PTCD3-204ENST00000418628 PAGE1O75459 146 aa19.31■□□□□ 0.68
PTCD3-204ENST00000418628 ABCB4P21439 1286 aa19.31■□□□□ 0.68
PTCD3-204ENST00000418628 TACR2P21452 398 aa19.31■□□□□ 0.68
PTCD3-204ENST00000418628 CDC25BP30305 580 aa19.31■□□□□ 0.68
PTCD3-204ENST00000418628 DGKGP49619 791 aa19.31■□□□□ 0.68
PTCD3-204ENST00000418628 SH3PXD2AQ5TCZ1 1133 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms