RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TNFRSF6BO95407 300 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 MT-CO3P00414 261 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 ITGA2BP08514 1039 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 TMIGD3P0DMS9 266 aaPredicted RBP3.03□□□□□ -1.92
VPS41-206ENST00000418457 APEHP13798 732 aaKnown RBP3.03□□□□□ -1.92
VPS41-206ENST00000418457 MMP8P22894 467 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 AKT1P31749 480 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 CHKAP35790 457 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 SERPINF1P36955 418 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 POLE2P56282 527 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 GPC5P78333 572 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 CFHR3Q02985 330 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 GRM4Q14833 912 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 SMN1Q16637 294 aaKnown RBP3.03□□□□□ -1.92
VPS41-206ENST00000418457 TUBB8Q3ZCM7 444 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 FAM90A2PQ658T7 463 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 FCRLBQ6BAA4 426 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 CCDC144NLQ6NUI1 221 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 RINT1Q6NUQ1 792 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 TMEM65Q6PI78 240 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 PIK3AP1Q6ZUJ8 805 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 KRT27Q7Z3Y8 459 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 NRSN1Q8IZ57 195 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 GALNT4Q8N4A0 578 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 LINC01465Q8N7H1 131 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 MAFAQ8NHW3 353 aaPredicted RBP3.03□□□□□ -1.92
VPS41-206ENST00000418457 WDR60Q8WVS4 1066 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 OVCA2Q8WZ82 227 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 EID2BQ96D98 161 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 EDC3Q96F86 508 aaKnown RBP3.03□□□□□ -1.92
VPS41-206ENST00000418457 CCDC17Q96LX7 622 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 FYTTD1Q96QD9 318 aaKnown RBP3.03□□□□□ -1.92
VPS41-206ENST00000418457 KATNAL1Q9BW62 490 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 TP63Q9H3D4 680 aaPredicted RBP3.03□□□□□ -1.92
VPS41-206ENST00000418457 SAP30LQ9HAJ7 183 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 PTPRHQ9HD43 1115 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 FSCN3Q9NQT6 498 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 VPS45Q9NRW7 570 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 RXFP3Q9NSD7 469 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 ASIC5Q9NY37 505 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 SCAF8Q9UPN6 1271 aaKnown RBP3.03□□□□□ -1.92
VPS41-206ENST00000418457 KNSTRNQ9Y448 316 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 MADDQ8WXG6 1647 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 SAMD9LQ8IVG5 1584 aa3.03□□□□□ -1.92
VPS41-206ENST00000418457 SCAF11Q99590 1463 aaKnown RBP3.03□□□□□ -1.93
VPS41-206ENST00000418457 NLRP1Q9C000 1473 aa3.03□□□□□ -1.93
VPS41-206ENST00000418457 WDR7Q9Y4E6 1490 aa3.03□□□□□ -1.93
VPS41-206ENST00000418457 DISP3Q9P2K9 1392 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 AOX1Q06278 1338 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 MYO3AQ8NEV4 1616 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 USP32Q8NFA0 1604 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 TCRBV5S1A1TA0A578 114 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 BTBD19C9JJ37 291 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 H3BNC9 293 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 TRIM38O00635 465 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 CTIFO43310 598 aaKnown RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 TPD52L2O43399 206 aaKnown RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 PRAMEF2O60811 474 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 FRAT2O75474 233 aaPredicted RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 C1RP00736 705 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 KLRK1P26718 216 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 IGHMBP2P38935 993 aaKnown RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 MFSD13AQ14CX5 517 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 FAM187BQ17R55 369 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 PROSER3Q2NL68 480 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 CERKLQ49MI3 558 aaPredicted RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 TMEM119Q4V9L6 283 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 ATPAF1Q5TC12 328 aaPredicted RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 PRAMEF17Q5VTA0 474 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 ANO1Q5XXA6 986 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 ERAP2Q6P179 960 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 MSANTD2Q6P1R3 559 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 KLHL17Q6TDP4 642 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 VSTM1Q6UX27 236 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 DCDC5Q6ZRR9 648 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 PRIMA1Q86XR5 153 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 DNAJC10Q8IXB1 793 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 CACNA2D3Q8IZS8 1091 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 ADAMTS18Q8TE60 1221 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 MORC4Q8TE76 937 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 SLC22A17Q8WUG5 538 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 PRR11Q96HE9 360 aaPredicted RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 TESK2Q96S53 571 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 PAAF1Q9BRP4 392 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 ADGRE3Q9BY15 652 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 CHMP4AQ9BY43 222 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 PNNQ9H307 717 aaKnown RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 FBXO28Q9NVF7 368 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 GAR1Q9NY12 217 aaKnown RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 HERC5Q9UII4 1024 aaKnown RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 FZD4Q9ULV1 537 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 NFU1Q9UMS0 254 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 VPS4AQ9UN37 437 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 UBE2J1Q9Y385 318 aaPredicted RBP3.02□□□□□ -1.93
VPS41-206ENST00000418457 PCDHB2Q9Y5E7 798 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 COX11Q9Y6N1 276 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 TRPM2O94759 1503 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 ADGRL1O94910 1474 aa3.02□□□□□ -1.93
VPS41-206ENST00000418457 PLB1Q6P1J6 1458 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms