RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 NUMBP49757 651 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 EIF3EP60228 445 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 CEACAM7Q14002 265 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 SEPT6Q14141 434 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 PCLAFQ15004 111 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 MOGQ16653 247 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 SLFN13Q68D06 897 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 XKR5Q6UX68 686 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 C15orf39Q6ZRI6 1047 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 RNF169Q8NCN4 708 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 DHRS1Q96LJ7 313 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ANKRD60Q9BZ19 345 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 FRMD8Q9BZ67 464 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 RPF2Q9H7B2 306 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 COQ10BQ9H8M1 238 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 GPRC5CQ9NQ84 441 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 TBC1D22BQ9NU19 505 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 NCKIPSDQ9NZQ3 722 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 FAM155AB1AL88 458 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 H3BMQ9 156 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 TAL1P17542 331 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 MSX2P35548 267 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 HARS2P49590 506 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 SERPINB9P50453 376 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 RGS21Q2M5E4 152 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 BRDTQ58F21 947 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 COG8Q96MW5 612 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 MAN1C1Q9NR34 630 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 TRIM64BA6NI03 449 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 CYP2C9P11712 490 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ME2P23368 584 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 BMXP51813 675 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 CD300CQ08708 224 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 EGFLAMQ63HQ2 1017 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 DNAJC24Q6P3W2 148 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 DCUN1D2Q6PH85 259 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 EPGNQ6UW88 154 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 HGH1Q9BTY7 390 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ANLNQ9NQW6 1124 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 GID8Q9NWU2 228 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 PTBP2Q9UKA9 531 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ERGIC3Q9Y282 383 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ARID2Q68CP9 1835 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 FAM159BA6NKW6 160 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 APOC4-APOC2K7ER74 178 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 NOP56O00567 594 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ACOT8O14734 319 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 MCF2LO15068 1137 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 KLHL41O60662 606 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 PLIN3O60664 434 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 APOC2P02655 101 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 PEX3P56589 373 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ABCE1P61221 599 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 INAQ16352 499 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 TBC1D10BQ4KMP7 808 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 N4BP2L1Q5TBK1 243 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 FAXCQ5TGI0 409 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 C15orf52Q6ZUT6 534 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 EEPD1Q7L9B9 569 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 THNSL1Q8IYQ7 743 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 PCYOX1LQ8NBM8 494 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ZNF577Q9BSK1 485 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 UNKQ9C0B0 810 aaKnown RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 GBA3Q9H227 469 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 TPK1Q9H3S4 243 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ATAD3AQ9NVI7 634 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 RGS17Q9UGC6 210 aaPredicted RBP8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 SERPINA10Q9UK55 444 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 B3GNT3Q9Y2A9 372 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 AP4S1Q9Y587 144 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 TANC1Q9C0D5 1861 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 RGSL1A5PLK6 1076 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 GLRA3O75311 464 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CALB1P05937 261 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 P4HA1P13674 534 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 GLDCP23378 1020 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 DCKP27707 260 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 RARRES1P49788 294 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 PKNOX1P55347 436 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 NLRP11P59045 1033 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC25A11Q02978 314 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TAP1Q03518 808 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 ENPEPQ07075 957 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 PDE1CQ14123 709 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 WDR44Q5JSH3 913 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TMEM270Q6UE05 265 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SETD3Q86TU7 594 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SNX32Q86XE0 403 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 PGAM4Q8N0Y7 254 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 ACMSDQ8TDX5 336 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TRUB1Q8WWH5 349 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 FAF2Q96CS3 445 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 CNDP1Q96KN2 507 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 FAM84AQ96KN4 292 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 GPR101Q96P66 508 aaPredicted RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 OLFM1Q99784 485 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 FERMT1Q9BQL6 677 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TEKT3Q9BXF9 490 aa8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 TDRD1Q9BXT4 1180 aaKnown RBP8.23□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC4A5Q9BY07 1137 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms