RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ATRIPQ8WXE1 791 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 CENPIQ92674 756 aaPredicted RBP8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ATP2A3Q93084 1043 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 NT5C3BQ969T7 300 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 OTUB2Q96DC9 234 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 RPRD1AQ96P16 312 aaPredicted RBP8.77□□□□□ -1.01
TRIM48-201ENST00000417545 SNRNP25Q9BV90 132 aaKnown RBP8.77□□□□□ -1.01
TRIM48-201ENST00000417545 TRPV4Q9HBA0 871 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.77□□□□□ -1.01
TRIM48-201ENST00000417545 DDX56Q9NY93 547 aaKnown RBP8.77□□□□□ -1.01
TRIM48-201ENST00000417545 IGSF9Q9P2J2 1179 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 AGO1Q9UL18 857 aaKnown RBP8.77□□□□□ -1.01
TRIM48-201ENST00000417545 HYOU1Q9Y4L1 999 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 ALG6Q9Y672 507 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 WNT6Q9Y6F9 365 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 CAPN6Q9Y6Q1 641 aa8.77□□□□□ -1.01
TRIM48-201ENST00000417545 DOCK8Q8NF50 2099 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 CCDC66A2RUB6 948 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 LRRD1A4D1F6 860 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 GRID2IPA4D2P6 1211 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 MIF4GDA9UHW6 222 aaKnown RBP8.76□□□□□ -1.01
TRIM48-201ENST00000417545 H3BRJ5 948 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 EEF2KO00418 725 aaKnown RBP8.76□□□□□ -1.01
TRIM48-201ENST00000417545 PSTPIP1O43586 416 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 ENDOD1O94919 500 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 IGLV3-27P01718 113 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 TACR2P21452 398 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 ADRA1BP35368 520 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 VCPP55072 806 aaKnown RBP8.76□□□□□ -1.01
TRIM48-201ENST00000417545 CDH6P55285 790 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 GNG11P61952 73 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 AMPD2Q01433 879 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 HTR4Q13639 388 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 KCNT1Q5JUK3 1230 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 SEL1L2Q5TEA6 688 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 CCDC181Q5TID7 509 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 OTUD1Q5VV17 481 aaPredicted RBP8.76□□□□□ -1.01
TRIM48-201ENST00000417545 VITQ6UXI7 678 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 TPGS1Q6ZTW0 290 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 BBS7Q8IWZ6 715 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 REXO1L1PQ8IX06 675 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 HJURPQ8NCD3 748 aaPredicted RBP8.76□□□□□ -1.01
TRIM48-201ENST00000417545 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.76□□□□□ -1.01
TRIM48-201ENST00000417545 OSCP1Q8WVF1 389 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 FGF14Q92915 247 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 IRF7Q92985 503 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 BHMTQ93088 406 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 EXOC4Q96A65 974 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 NTAN1Q96AB6 310 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 TBC1D31Q96DN5 1066 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 SLC39A13Q96H72 371 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 ZFRQ96KR1 1074 aaKnown RBP8.76□□□□□ -1.01
TRIM48-201ENST00000417545 ASB2Q96Q27 587 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 HAPLN3Q96S86 360 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 CALN1Q9BXU9 219 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 MAK16Q9BXY0 300 aaKnown RBP8.76□□□□□ -1.01
TRIM48-201ENST00000417545 GOLPH3Q9H4A6 298 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 KLHL11Q9NVR0 708 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 GPATCH2LQ9NWQ4 482 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 ARHGEF38Q9NXL2 777 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 SALL4Q9UJQ4 1053 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 VANGL2Q9ULK5 521 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 FZD10Q9ULW2 581 aa8.76□□□□□ -1.01
TRIM48-201ENST00000417545 TCF20Q9UGU0 1960 aaKnown RBP8.75□□□□□ -1.01
TRIM48-201ENST00000417545 USP27XA6NNY8 438 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 CHADO15335 359 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 ASGR2P07307 311 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 FCARP24071 287 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 GGCXP38435 758 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF135P52742 658 aaPredicted RBP8.75□□□□□ -1.01
TRIM48-201ENST00000417545 RWDD2BP57060 319 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 PFKPQ01813 784 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 GAD2Q05329 585 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 RPS6KA1Q15418 735 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 MPPE1Q53F39 396 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 RAB6CQ53S08 254 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 MS4A13Q5J8X5 152 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 ADGRF1Q5T601 910 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 TTC39BQ5VTQ0 682 aaPredicted RBP8.75□□□□□ -1.01
TRIM48-201ENST00000417545 RFWD3Q6PCD5 774 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 POLNQ7Z5Q5 900 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF354CQ86Y25 554 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 PSTKQ8IV42 348 aaKnown RBP8.75□□□□□ -1.01
TRIM48-201ENST00000417545 SLC35F6Q8N357 371 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 KIAA1958Q8N8K9 716 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 UBE2Q2Q8WVN8 375 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 TEKT4Q8WW24 435 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 RSAD2Q8WXG1 361 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 MARVELD3Q96A59 401 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 AZIN2Q96A70 460 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 TMA16Q96EY4 203 aaKnown RBP8.75□□□□□ -1.01
TRIM48-201ENST00000417545 RBM41Q96IZ5 413 aaKnown RBP8.75□□□□□ -1.01
TRIM48-201ENST00000417545 ZFYVE19Q96K21 471 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 XPO6Q96QU8 1125 aaKnown RBP8.75□□□□□ -1.01
TRIM48-201ENST00000417545 BBS2Q9BXC9 721 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 ADAM33Q9BZ11 813 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 RAB6CQ9H0N0 254 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 CATSPERBQ9H7T0 1116 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 KCNK12Q9HB15 430 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 CALCOCO1Q9P1Z2 691 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms