RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 STIM1Q13586 685 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 ZNF234Q14588 700 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 TRIP6Q15654 476 aaKnown RBP7.29□□□□□ -1.24
COPS3-202ENST00000417352 GEN1Q17RS7 908 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 CCDC40Q4G0X9 1142 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 KLHDC10Q6PID8 442 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 ANKS1BQ7Z6G8 1248 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 CCDC117Q8IWD4 279 aaPredicted RBP7.29□□□□□ -1.24
COPS3-202ENST00000417352 CHCHD4Q8N4Q1 142 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 ZCCHC9Q8N567 271 aaKnown RBP7.29□□□□□ -1.24
COPS3-202ENST00000417352 ZNF366Q8N895 744 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 PNPLA1Q8N8W4 532 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 ANKRD52Q8NB46 1076 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 CYB5D2Q8WUJ1 264 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 SMARCE1Q969G3 411 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 TMA16Q96EY4 203 aaKnown RBP7.29□□□□□ -1.24
COPS3-202ENST00000417352 GABRG3Q99928 467 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 ULBP1Q9BZM6 244 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 PNPLA8Q9NP80 782 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 ELOVL2Q9NXB9 296 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 CLIC5Q9NZA1 410 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 MARK1Q9P0L2 795 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 SUSD2Q9UGT4 822 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 ARMCX3Q9UH62 379 aaPredicted RBP7.29□□□□□ -1.24
COPS3-202ENST00000417352 HOOK1Q9UJC3 728 aaKnown RBP7.29□□□□□ -1.24
COPS3-202ENST00000417352 TSPAN16Q9UKR8 245 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 CEP83Q9Y592 693 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 PCDHB4Q9Y5E5 795 aa7.29□□□□□ -1.24
COPS3-202ENST00000417352 ASCC3Q8N3C0 2202 aaKnown RBP7.28□□□□□ -1.24
COPS3-202ENST00000417352 A0A1W2PQ27 194 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 A0A1W2PQ64 194 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 A0A1W2PQD8 194 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 TULP2O00295 520 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 GFRA2O00451 464 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 MSI1O43347 362 aaKnown RBP7.28□□□□□ -1.24
COPS3-202ENST00000417352 TIMM44O43615 452 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 SH3BP5O60239 455 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 GREM1O60565 184 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 OXTRP30559 389 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 HOXD12P35452 270 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 CLCN1P35523 988 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 IL12RB1P42701 662 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 TPMTP51580 245 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 BCAT1P54687 386 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 MFAP3P55082 362 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 FAM193AP78312 1265 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 PDE4CQ08493 712 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 CETN1Q12798 172 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 CUL2Q13617 745 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 E2F5Q15329 346 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 EDRF1Q3B7T1 1238 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 CBWD6Q4V339 395 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 MPPE1Q53F39 396 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 CBWD3Q5JTY5 395 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 CBWD5Q5RIA9 395 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 DCAF12L1Q5VU92 463 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 FYB2Q5VWT5 728 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 BSPRYQ5W0U4 402 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 ANKRD40Q6AI12 368 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 KLHL10Q6JEL2 608 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 TMEM270Q6UE05 265 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 CHST9Q7L1S5 443 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 ADAT2Q7Z6V5 191 aaKnown RBP7.28□□□□□ -1.24
COPS3-202ENST00000417352 RETREG3Q86VR2 466 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 PPM1KQ8N3J5 372 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 EHBP1Q8NDI1 1231 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 TMEM174Q8WUU8 243 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 ZCCHC14Q8WYQ9 949 aaKnown RBP7.28□□□□□ -1.24
COPS3-202ENST00000417352 PLD4Q96BZ4 506 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 NUP58Q9BVL2 599 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 MKRN2Q9H000 416 aaKnown RBP7.28□□□□□ -1.24
COPS3-202ENST00000417352 MIS12Q9H081 205 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 GAREM1Q9H706 876 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 ST7Q9NRC1 585 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 OLA1Q9NTK5 396 aaKnown RBP7.28□□□□□ -1.24
COPS3-202ENST00000417352 ABCB8Q9NUT2 735 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 EIF2B4Q9UI10 523 aaKnown RBP7.28□□□□□ -1.24
COPS3-202ENST00000417352 KLK13Q9UKR3 277 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 CLEC4EQ9ULY5 219 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 ZDHHC9Q9Y397 364 aa7.28□□□□□ -1.24
COPS3-202ENST00000417352 TNRC6BQ9UPQ9 1833 aaKnown RBP7.28□□□□□ -1.24
COPS3-202ENST00000417352 KMT2BQ9UMN6 2715 aaPredicted RBP7.28□□□□□ -1.24
COPS3-202ENST00000417352 A0A1B0GTW7 788 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 GOLGA6L7A0A1B0GV03 622 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 TYW5A2RUC4 315 aaKnown RBP7.27□□□□□ -1.25
COPS3-202ENST00000417352 TRIM49BA6NDI0 452 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 YJEFN3A6XGL0 299 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 E7ENQ6 273 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 M0QYV0 167 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 CAPN9O14815 690 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 XPO1O14980 1071 aaKnown RBP7.27□□□□□ -1.25
COPS3-202ENST00000417352 NPC1O15118 1278 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 BCAT2O15382 392 aaPredicted RBP7.27□□□□□ -1.25
COPS3-202ENST00000417352 SIAH2O43255 324 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 TBL1XO60907 577 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 FSBPO95073 299 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 MOCS2O96007 188 aaPredicted RBP7.27□□□□□ -1.25
COPS3-202ENST00000417352 CALCAP01258 141 aa7.27□□□□□ -1.25
COPS3-202ENST00000417352 ATP5BP06576 529 aaKnown RBP7.27□□□□□ -1.25
COPS3-202ENST00000417352 VDRP11473 427 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms