RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 ARHGEF38Q9NXL2 777 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 RRN3Q9NYV6 651 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 FZD10Q9ULW2 581 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 USP18Q9UMW8 372 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 VPS9D1Q9Y2B5 631 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 TLR6Q9Y2C9 796 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 HBS1LQ9Y450 684 aaKnown RBP8.37□□□□□ -1.07
MDC1-203ENST00000417033 WNT6Q9Y6F9 365 aa8.37□□□□□ -1.07
MDC1-203ENST00000417033 HEPACAM2A8MVW5 462 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 PRPSAP2O60256 369 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 KIF5CO60282 957 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 RNF8O76064 485 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 KRT1P04264 644 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 ATP1A1P05023 1023 aaKnown RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 LAMP2P13473 410 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 CTNNA2P26232 953 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 GBP1P32455 592 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 ADRA1BP35368 520 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 PCK1P35558 622 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 ARSEP51690 589 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 GNG11P61952 73 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 MMRN1Q13201 1228 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 ZNF211Q13398 564 aaPredicted RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 NNTQ13423 1086 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 GRM2Q14416 872 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 PPP2R5DQ14738 602 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 FAM133BQ5BKY9 247 aaKnown RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 MS4A13Q5J8X5 152 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 RAP1GAP2Q684P5 730 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 TRIM68Q6AZZ1 485 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 PTCRAQ6ISU1 281 aaPredicted RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 RFWD3Q6PCD5 774 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 VITQ6UXI7 678 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 NYAP1Q6ZVC0 841 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 PEX26Q7Z412 305 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 TADA2BQ86TJ2 420 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 CIR1Q86X95 450 aaPredicted RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 PARP9Q8IXQ6 854 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 RAPGEF5Q92565 580 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 FGF14Q92915 247 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 SMARCD2Q92925 531 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 PLD4Q96BZ4 506 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 ZFYVE19Q96K21 471 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 RPGRIP1Q96KN7 1286 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 PRICKLE1Q96MT3 831 aaPredicted RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 NECTIN4Q96NY8 510 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 CDK5RAP1Q96SZ6 601 aaKnown RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 SIK2Q9H0K1 926 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 LINC00597Q9H2U6 94 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 DHX35Q9H5Z1 703 aaKnown RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 WDCPQ9H6R7 721 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.36□□□□□ -1.07
MDC1-203ENST00000417033 TDP1Q9NUW8 608 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 AGO1Q9UL18 857 aaKnown RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 AP4E1Q9UPM8 1137 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 NEU3Q9UQ49 428 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 MFHAS1Q9Y4C4 1052 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 HS3ST4Q9Y661 456 aa8.36□□□□□ -1.07
MDC1-203ENST00000417033 HELZP42694 1942 aaKnown RBP8.36□□□□□ -1.07
MDC1-203ENST00000417033 NUP210Q8TEM1 1887 aaPredicted RBP8.35□□□□□ -1.07
MDC1-203ENST00000417033 GOLGA6L9A6NEM1 432 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 C3orf70A6NLC5 250 aaPredicted RBP8.35□□□□□ -1.07
MDC1-203ENST00000417033 ACSL4O60488 711 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 TSPAN3O60637 253 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 F9P00740 461 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 APOEP02649 317 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 ARSAP15289 507 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 PFKLP17858 780 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 CCR1P32246 355 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 CTNNA1P35221 906 aaKnown RBP8.35□□□□□ -1.07
MDC1-203ENST00000417033 SLC1A1P43005 524 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 PEX5P50542 639 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 COG7P83436 770 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 RING1Q06587 406 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 SCAPQ12770 1279 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 SEMA3BQ13214 749 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 HTR4Q13639 388 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 ACAP1Q15027 740 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 SMAD2Q15796 467 aaKnown RBP8.35□□□□□ -1.07
MDC1-203ENST00000417033 IFI16Q16666 785 aaKnown RBP8.35□□□□□ -1.07
MDC1-203ENST00000417033 BRMS1LQ5PSV4 323 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 MEI1Q5TIA1 1274 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 MANEALQ5VSG8 457 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 SYT10Q6XYQ8 523 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 LAPTM4BQ86VI4 370 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 CHSY1Q86X52 802 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 RHOT1Q8IXI2 618 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 ZNF683Q8IZ20 524 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 TDRD5Q8NAT2 981 aaKnown RBP8.35□□□□□ -1.07
MDC1-203ENST00000417033 NETO2Q8NC67 525 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 TRIM58Q8NG06 486 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 IGSF8Q969P0 613 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 NTAN1Q96AB6 310 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 HES6Q96HZ4 224 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 ALS2CR12Q96Q35 445 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 PRMT1Q99873 361 aaKnown RBP8.35□□□□□ -1.07
MDC1-203ENST00000417033 PCDH18Q9HCL0 1135 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 GDE1Q9NZC3 331 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 SMARCAL1Q9NZC9 954 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 EPS15L1Q9UBC2 864 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms